Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05514 ATGAAGGAGGAGCAAGAGAAACAAGATCATGCTCTTGTTGTTTCAGAACAACAAGCTGTTCTTGAGGAGGAAGAAAGGCAAAAGAAAGAGAAGCAGAAGAAGCAAGATTATGCTTTTGCTATTACTGCACAACAAGCTTATCTTGAAGATGAAAAGTTGGAGCAAGCCTCTAGGCTCAAAAGAAGAAGACAAAGTGCTCATAAAAGGAGAGGTGCTAAGAAGATTAGGCTGCTTGAACCTATCATTCAAGCTTCACCTATCAGAACTAGGAGAAGCATACAAGAGGCTAGAGCTGTCAAGTTCCAGGAAATGGCAGAAATGCAAAGGAAGAAGGCTCTGGAGGTGTTGCATCAGAAGAAGAAAGCTGCTAAAGAGACTCAGGCACGTGTCAAAAGACCTAGAGTACTTCTTGATAATGTGTCTAATTCAGAAGATGAAGCTACACCTGCTCAGTTGAGTCTGCAAAATTCTGAACCTATTCCCCCACCTGCACCTGAACCAGAACCAGAACCAGAACCTTCACCACCTCAAACTTCAGTAGATTCTCAAACTGTGGATGATGAGGATTCTGACCGCATATGGTTCGGAGGAAATCTCTCTAAAGCAATTCTGCTGAAAGCCAAGACCAGAGACTACTCCAGGAAACCATCTCAGGATCTTGCATTGAGTTTTCAGAATGAACAGCAAATGTTGTGGGTTGCGAAAGACTATCCACCTCTACAGCTTCATGATCTATCAAAGTTTGAGCTGGAAACCTCTTCAGAGGCAGAAATGAGAAGGAGCAGAAGAGGAGGACGTGTAGCTGATGCCCTTGAGGAGATTCGCAGTTGGGCTGTTAAAGCTCAGCACAAGTGGAAATTGTTGAACCCATTCACTGATGATAGAATGATGTTTTCTTATGAAGACTGGACTGTGGTTAGAATGTTATGTCTTGAATCTGAGTTGGTAGAACTTCAATGTCAAAAGCTCTTTGGTCTAAGAGGATTCATCCTACCTTCAAGTATCCATATCAAACCCTACACTGAGATCAAGAAGGTTATAGCATCATATTCAGATAAGGGACCCAAAGTCTTATCTGATGAGGAGTGGGCGCTCTTAGCTGAAGAAGTCGCTATAGAAGGAGGCATGGATCATTCTCTGTATAATGCTATGTGGGACTACCACTGGAATCTTGTAGAACAAGACAAAAGCTGCTCAGGCACGAAATGGGATGATGTTGACTTAATGGTCAAGGTTGGGAAGAATACTACTCTTGAAACTCCAACATTCTTCAGAGGAAGATTTCCCTCATATAACTTTGATCATCATAATTTCCATTATGACTGGGAAGTCATGAAGTATGTTCTTGATCAACCACGGTTTGTAAAAGTGACTGATGCCAGAAAGTTCAACCTTCCTACTGGGTTTAACTTTTCAAATACTATGGCAAGCAACTCACCTTACTGGTGTCGCGCCGTCGTCCTCTACCCGCGCCGTCGTCCTCTGCCCGCGCCGTCATGCAGCTCTGTGTTGTCGTCCTCTGTGCCGCGTCATCATCCCTCTCTTCTTCCTTCTGTCTGTGTGGTTGCAGCTCTTTGTTGGTGGCAACTGGAAGTGTCTGAAGAGAGAAGAGTCTCCAGACACGGGGAAAAAAATTGTTCTGAGCCTGCACTTAAGAGGCCAAGAATTGAGACCCCATCTCCATTACCAACTTTTAAGGTTCGGAAAGAGAAACTGGGGGACCGAATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGGTGACCACTGAATTTATTTGGATGTTTCTGTAG 1797 0.4385 MKEEQEKQDHALVVSEQQAVLEEEERQKKEKQKKQDYAFAITAQQAYLEDEKLEQASRLKRRRQSAHKRRGAKKIRLLEPIIQASPIRTRRSIQEARAVKFQEMAEMQRKKALEVLHQKKKAAKETQARVKRPRVLLDNVSNSEDEATPAQLSLQNSEPIPPPAPEPEPEPEPSPPQTSVDSQTVDDEDSDRIWFGGNLSKAILLKAKTRDYSRKPSQDLALSFQNEQQMLWVAKDYPPLQLHDLSKFELETSSEAEMRRSRRGGRVADALEEIRSWAVKAQHKWKLLNPFTDDRMMFSYEDWTVVRMLCLESELVELQCQKLFGLRGFILPSSIHIKPYTEIKKVIASYSDKGPKVLSDEEWALLAEEVAIEGGMDHSLYNAMWDYHWNLVEQDKSCSGTKWDDVDLMVKVGKNTTLETPTFFRGRFPSYNFDHHNFHYDWEVMKYVLDQPRFVKVTDARKFNLPTGFNFSNTMASNSPYWCRAVVLYPRRRPLPAPSCSSVLSSSVPRHHPSLLPSVCVVAALCWWQLEVSEERRVSRHGEKNCSEPALKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKVTTEFIWMFL. 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05514 598 CDD bHLH_AtbHLH_like 562 591 IPR045239 -
Seca9g05514 598 MobiDBLite consensus disorder prediction 156 176 - -
Seca9g05514 598 Coils Coil 12 34 - -
Seca9g05514 598 MobiDBLite consensus disorder prediction 19 34 - -
Seca9g05514 598 MobiDBLite consensus disorder prediction 116 132 - -
Seca9g05514 598 MobiDBLite consensus disorder prediction 141 155 - -
Seca9g05514 598 MobiDBLite consensus disorder prediction 1 34 - -
Seca9g05514 598 MobiDBLite consensus disorder prediction 116 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05514 Seca-Chr9 163108923 163113024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05514 551 591 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G05170 87.805 3.06e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05514 - - ming:122065354 92.4337