Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05512 ATGGAGTGCAATAAGGATGAGGCCATCAGAGCTAAAGAAATTGCTGAGAAAAAGTTTGTTGCAAAGGATATCTTGGGAGCAAGAAAGTTTGCTTTGAAGGCCCAAAGTTTATTTCCTAGTCTTGATGGTATTTCTCAAATGTCAACAGTAATTAATGTGTATTTTTCTGCTACTCATGAAATAAATGGTAAAGTAGTCCTAAATTGGTATGGTATACTTGGTGTGGATCCCCTGGCTGATGGTGACACATTGAGGAAACAATATAGAAAGTTGGTTCATATGCTTCACCCTGATAATAACAAGTCCATTGGTGCAAATTCAGCCTTTAAACTAGTTTCAGAGGCATGGAATATACTATCAGATAAGGCAAAAAGGGTAGCATATGATGAGCGGATAAATGCAATGACTCAGGGGAAAACTGCTGAAGAGATTAGCAAGAAACCAAATCAAATTCAGACAAATTCTAATGACAAAACAACAGTGAAAGAGATCATTGGAAATGCCTACGAAAAAGCAAATGAGGAAGGAGGAAAATCTGTAAGAAACTCAGACGAAAGAATGAATGGATCCGAAGCCATGAATTTATTTGCAGGCACTACCACATATGATGACATGGAGGACATGTTATCAATAGATGTTCCAGATCCTCATTTCTATTGTTTTGACAAGGATCGAATTGAAGGATCTTTTGGTGAAAATCAGGTATGGGCTGCATTTGATGAAGAAGAAGGAATGCCTCGATATTATGCAATAATACACAATGTCATTTCTATGAATCCATTCAAGATGCAGTTCAGTTGGCTCGAGATGAAGAAGACCAAGGTTGAAAGGACCCCAACTCTTAATTGGGGTGTGTCACGCTTTTCAAGAGCTTGTGGGAATTTCATAATGGGAAGACGTGCAATCACTAACACGTTCAATTTTTTCTCTCACAAAGTGAGATATGAAAATGGTAATAATGGAACTGTTTTTATATATCCCAGGAAAGGGGATGTTTGGGCACTCTATAGAAATTGGTCTTCCAAATGGAATAGACTAACACCTGATGAGGTGACACAAAAGTATGATATAGTTGAAGTACTTGATGTTTTCAATGATTTCATTGTCATTCCTCTGGTCAAAGTGGCTGGTTTTAGGACAATATTTCGTCGTGAGTTGGATTTGAGAGAAACCAGGGTCATTCCAAGGAAAGAAATATTGCGGTTCTCTCATCAGGTTCCTTCAACCATACTTAGTGGTGAAGAAGCTCCAGATGCCCCAAAGGGTTGTTGGGAGTTGGACCCAGCAACTATTTCATCTGAACATCTTGAGGTGATCAAAGTTGTTAAGGACAAAGATATGGTTATGGTCAAGAATGAGGATACTATAATTAAAGAAACAACAGATGATAGCATGAAAGAAACTGCTAGTGAGGAAATGAACAATGATATGGAACACATGGCGAAGAAAAAAAGGAGATATTGA 1464 0.3798 MECNKDEAIRAKEIAEKKFVAKDILGARKFALKAQSLFPSLDGISQMSTVINVYFSATHEINGKVVLNWYGILGVDPLADGDTLRKQYRKLVHMLHPDNNKSIGANSAFKLVSEAWNILSDKAKRVAYDERINAMTQGKTAEEISKKPNQIQTNSNDKTTVKEIIGNAYEKANEEGGKSVRNSDERMNGSEAMNLFAGTTTYDDMEDMLSIDVPDPHFYCFDKDRIEGSFGENQVWAAFDEEEGMPRYYAIIHNVISMNPFKMQFSWLEMKKTKVERTPTLNWGVSRFSRACGNFIMGRRAITNTFNFFSHKVRYENGNNGTVFIYPRKGDVWALYRNWSSKWNRLTPDEVTQKYDIVEVLDVFNDFIVIPLVKVAGFRTIFRRELDLRETRVIPRKEILRFSHQVPSTILSGEEAPDAPKGCWELDPATISSEHLEVIKVVKDKDMVMVKNEDTIIKETTDDSMKETASEEMNNDMEHMAKKKRRY. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05512 487 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Seca9g05512 487 Pfam Domain of unknown function (DUF3444) 210 415 IPR024593 -
Seca9g05512 487 SUPERFAMILY Chaperone J-domain 66 133 IPR036869 -
Seca9g05512 487 MobiDBLite consensus disorder prediction 461 487 - -
Seca9g05512 487 MobiDBLite consensus disorder prediction 461 481 - -
Seca9g05512 487 Pfam DnaJ domain 68 129 IPR001623 -
Seca9g05512 487 Gene3D DnaJ domain 67 182 IPR036869 -
Seca9g05512 487 PRINTS DnaJ domain signature 124 143 IPR001623 -
Seca9g05512 487 PRINTS DnaJ domain signature 88 103 IPR001623 -
Seca9g05512 487 PRINTS DnaJ domain signature 70 88 IPR001623 -
Seca9g05512 487 PRINTS DnaJ domain signature 104 124 IPR001623 -
Seca9g05512 487 SMART dnaj_3 67 124 IPR001623 -
Seca9g05512 487 PANTHER BNAC03G44070D PROTEIN 1 430 - -
Seca9g05512 487 CDD DnaJ 68 121 IPR001623 -
Seca9g05512 487 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05512 Seca-Chr9 162964066 162965529 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05512 4 135 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.235 4.30e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05512 - - ahf:112751648 337.421