Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05502 ATGGAGTGCAATAAGGATGAGGCCATCAGAGCTAAAGAAATTGCTGAGAAAAAGTTTGTTGCAAAGGATATTTTGGGAGCCAGAAAGTTTGCTTTGAAGGCCCAAAGTTTATTTCCTAGTCTTGATGGTATTTCTCAATTGTTAACAGTAATTAATGTGTATAAATCTGCTACTAATGAAATAAATGGTAAAGTAGTCCCAAATTGGTATGGTATACTTGGTGTGGATCCCCTGGCTGATGATGACACATTGAGGAAACAGTATCGAAAGATGGTTCATATGCTTCATCCTAATAATAACAAGTCCATTGGTGCAGATTGGGCCTTTAAACTAGTTTCAGAGGCATGGAACATACTATCAGATAAGGCTAAAAGGGTAGCATATGATGACAAGATAAATGCAATGACTCAGGAGAAAACTGTTGAAGAGATTAGCAAGAAACCAAGTCAAATTCAGACAGATTCTGATGACAAAACAACAGTGAAAGAGATCACTGGAAATACCTATCAAAAAGCAAATGAGGAAGGAGGAAAATATGATCGAATTGAAGGATCTTTTGGTGAAAATCAAGTATGGGCTTTATTTGATGAACAAGAAGGGATGCCTCGATATTATGCAATAATACACAATGTCATTTCTATGAATCCATTCAAGATGCAGTTCACCTGGCTCGACATGAAGAAGACTGAGGTTGAAAGGACCCCGACTCTGAATTGGGGTGCGTCACGCTTTTCAAGAGCTTGTGGGAATTTCATAATGGGAAGACATGAGATCACTAACACATTCAATTTTTTCTCTCACAAAGTGAGATATAAAAAGGGTAATGATGGAACTATTTTTATATATCCCAACAAAGGGGATGTTTGGGCACTCTATAGAAATTGGTCTTCCAAATGGAATAGATTAACACCTGATGAAGTGACACAAAAGTATGATATTGTTGAAGTATTGGATGTTTTCAGTGATTTCATTGTCATTCCTCTGGTCAAAGTGGTTGATTTCAGGACAATATTTCGTCGTGAGTTGGATTTGAGAGAAATCAGGGTCATTCTGTAA 1056 0.3712 MECNKDEAIRAKEIAEKKFVAKDILGARKFALKAQSLFPSLDGISQLLTVINVYKSATNEINGKVVPNWYGILGVDPLADDDTLRKQYRKMVHMLHPNNNKSIGADWAFKLVSEAWNILSDKAKRVAYDDKINAMTQEKTVEEISKKPSQIQTDSDDKTTVKEITGNTYQKANEEGGKYDRIEGSFGENQVWALFDEQEGMPRYYAIIHNVISMNPFKMQFTWLDMKKTEVERTPTLNWGASRFSRACGNFIMGRHEITNTFNFFSHKVRYKKGNDGTIFIYPNKGDVWALYRNWSSKWNRLTPDEVTQKYDIVEVLDVFSDFIVIPLVKVVDFRTIFRRELDLREIRVIL. 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05502 351 Pfam Domain of unknown function (DUF3444) 179 343 IPR024593 -
Seca9g05502 351 ProSiteProfiles dnaJ domain profile. 68 132 IPR001623 -
Seca9g05502 351 Pfam DnaJ domain 68 129 IPR001623 -
Seca9g05502 351 SUPERFAMILY Chaperone J-domain 67 132 IPR036869 -
Seca9g05502 351 PRINTS DnaJ domain signature 88 103 IPR001623 -
Seca9g05502 351 PRINTS DnaJ domain signature 70 88 IPR001623 -
Seca9g05502 351 PRINTS DnaJ domain signature 104 124 IPR001623 -
Seca9g05502 351 PANTHER BNAC03G44070D PROTEIN 1 132 - -
Seca9g05502 351 Gene3D DnaJ domain 67 181 IPR036869 -
Seca9g05502 351 CDD DnaJ 68 121 IPR001623 -
Seca9g05502 351 SMART dnaj_3 67 124 IPR001623 -
Seca9g05502 351 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05502 Seca-Chr9 162662903 162664089 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05502 4 133 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.552 2.05e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05502 - - lja:Lj2g3v0520120.1 221.09