Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05453 ATGGCACACCATGTGGCTGCCTCATCCTCCTCCTTTTCTTTCAGCCATGGATGGGTTTACCATGTTTTCTTGAGCTTTAGAGGTGCAGATACACGTGAGACTTTTACTGGCAACCTTTACAATGCTCTTGATCAAAGGGGAATCAACACTTTCATAGATGATGAGGAGCTGAGGATTGGAGAAGAGATTTCACCATCTCTTCTCAGAGCAATAGAAGAGTCAAGGATTGCCATCATCATATTCTCCAAGAATTATGCTACTTCCACTTGGTGCCTGGATGAACTTGTGAAGATCCTTGAGTGTAAGAAAGAAAAGGGACAGGTGGTTTGTTCAGTTTTCTATAACGTGGATCCATCAGATGTGAGGCACCAGAAAGGAAGTTATGAAGAAGCATTTGTTAAGCATGAAAAAAGATTCAAGCATAACAAGGAGAAGCTGCAGAAATGGAGGTCAGCTTTGTTTGAAGCCGCAAACCTGTCTGGCTGGCATTTTAGTAATGGGTATGAATTTAAATTTATCCAAAGAATAGTAGATGAGGTATCAAGCAAGTTGAATCGCATCCCACTAAATGTTGCTAGATACCCTGTTGGACTCCAAGCTCGTGTATCAGATGTTACCTTACTCTTAGAACTTGGATGTGAAGATGTTAGAATGGTAGGAATTTATGGGATTGGTGGAATTGGTAAAACAACCATTGCTAAAGCTGTTTACAACTCAGTATATGATCAATTTCGATATGCCAGTTTTCTTGCAAATGTAAGAGAAAATGCAAGCCATAGAGCTGGCTTAGTAAAACTCCAAGAGAGACTTCTATTTGAGATACTTGGAGAGAAAACAATAAAGTTAGGCAATGTTGACAGAGGAATCAACATAATAAAGGATAGACTATGCAGAAAAAGTGTTCTACTAGTTCTTGATAATGTGGATGATGTGGAACAACTACAAGCTTTAGCAGGAGGATTTGATTGGTTTGGTCCTGGAAGTAGGATTATTATAACTACAAGAGATAAACATTTGCTAACTGCTCATCAAGTTGATTTGACTTATGAGGTGAAGAAGTTGAATCATTTTGAAGCTCTTCAACTATTTAGTTGGAATGCCTTCAAAAGAAGTGAACCTGATGCAAGATATTTTGACATTTCAAACCGTGCAGTATGTTATGCAGAGGGTCTTCCATTGGCTTTAAACATTTTGGGTTCTGATTTGTGTGGTAGAAGCATTCATCAATGGGAATCTGCATTGGATAAGTACAAGAGAACTCCTAATAGGAAAGTTCAGGATATACTTAAAATAAGCTTTGATGGGTTAGAGGAAAATGAAAAGGAAATTTTCCTCTATATTGCTTGTTTCTTCAAAGGAGAGATAATGGAATATGCAACAAAAGCACTACGTGCTTGTGATCTTCACCCAGCTATTGGTATTGCAGTACTTGTTGATAAGTCTCTCATAACTTTAGATGAAAGACATGTATTGTCAATGCATGATCTTATACAAGATATGGGTAAGGAAATAGTTAGGCAAGAATCACCACTAGATCCTGGAAAACGCAGCAGATTATGGTATTATGAGGATGTGCTTCAAGTATTGACTGAAGGGATGGGAAGTGACAAGATTCAAGGTATAATGCTGAACCTACCTGAAAAGCAAGAGGTGCAGATAAAAACTCAAGACCTCAAGAAGATGAAAAACCTTAGAATGCTTATAGTTCGTAATGCTGAATTTTTTGGAGGCCATGTACACCTACCAAGCAATCTAAGGCTGCTTGATTGGGAGGAATACCCTTCTCCATGTTTACCATTTGATTTCCTTCCAGATAAAATTGTAATGCTAGAGTTGCGGCATAGTCATCTAACATTAGACAAGCCATTCAAGAAGTATGCAAATCTGACTTCTCTGAACTTTAGTTCTTGTGAATTCCTGACAAAATTACCTGATGTTTCTGGCATCCCAAATTTAGAGCAATTGATTCTTGAAGATTGTAAAGGTTTAGTTGAGATTCATGAATCCCTTGGATCACTTGATAAATTGGTTTACTTAGGTGTTGAAAGGTGCAATGAGCTAAAGAATTTACCAAGTGTCCTCAAGTTGCCATCTTTAGGGTGCATTGCTCTTAATGGATGTTCTCAACTTGAGAAGTTCCCAGCTTTATTGGGAAAAATGGATAATCTGAGAATTATTGAGGCAGAAGAGACAGCTATACAAGAATTGCCTTCTAATGTGGTCAATTTCAACAGCCTTGAGATTTTAATACTAAAGCACTGCTCAAATCTTAAGGAACTTCCTAAAACCATTGATATGTTGCCAAATCTTCAGCTACTTGATATTTCTGGCTGTCCAAAACTTCAACTATTTCCAGAGAAACTCAGTTGTTTCAGCACCCAAAATTGTTCAACTATGCTTCGAGAGTCCAATGGAAGTTCATCAAATTTAGAGTTACTACCTGCACCATGTGTAGATTTAGTCTCTCCAGGCATTCAATCCTCATATGGGTTCCCTTTGTTGGAAAGCCTTGATCTCAGTGACTGCAATCTATCAGATGAAGATCTACATATCCTTAGTTGCTTTTCCAACCTTATATCCTTAGACATATCAAGAAACCATTTTGAAACCCTACCCAAATGCTTCAACAAACTTAGTAGCTTGCAGGAGCTTTACATGGCCAATTGCAGGAACCTTCAACAAATATCTGGGATTCCACCTAATTTAGAACATATAGATGCCACTAGTTGCACACTGTTGAATTCACAATCATTGAGCCTGTTATTAAGCCAGGGATTCCAAAAGGCATCAAAATTTGAAGTTATAGCACCTAGGCCAAGGATACTAATGCCATTCAACTACCACAGCAAAGAAGGATCCATGTCATTCTTGATTGGCCAGAAGTTCCCTAGAATTGCTCTTTGTTTCTCTTTTGGACTAGGAAATAAAAGAATTGGTTTTTTCACCTGTGAGGTCCAGCTTTCTATTAATGGACAAAAAGCATCCAATAGAGTACAGCACTTTCTTTCAGTTTTTGGTGATCTTGCATGGCTGTATCATCAAGAAGATTTGATGGATTTAGATACATATTTACTGCATGAACAGAATTATGTGGAAATTTCTTGTGAAATTATAGATGCAAGTAAAGCTGCAGAAGTGATGATATACAGTTGTGGAGTTCATGAGTATAAGGAAGATGAGGAAATGAAGAAACCAAATTTGATATTGTGCACAAGTTCTAGTCCTAATAATACCAAATTGGGGTGTAATGACTTCTTGCACGACACTCAATTTTCTAGGGAAAGCCCTGAAAATCATTGTCAATATGATGATACCTTGGGAATTGATTGCTGCTCATTGCCTGAAAATTTGAGGCTTTATGAAATATCACATGAGAAGATACAACAACTTTCAGCTTCAATCAACCCAGAAATGCTTGAAGGTAATGATTATATGGCTCAGAATAAGGGAAACACTACATATATTATGTTGGCTGATACAATGCATCAAAGCAAGGAGATGTCTTCATTGCATCTGCAACTATATGGTGACAGTACCTGGGATCCAATGCTATTAGAATGTCAGTTGAACTGCATGAATGAGACTCAACTTGTTCCTAATTACTGCCGCACCTCTGAAAACAAAGGTAAGAAAGAGTCAGAGACAGAAGTTGGTCTTACACTTGCTAGGGCTCTAATTCCTCCAACCAAAGCTGGAGCAAAAGCCTATGAAAATGTTGTTCTTAAGGAGGACTTGGAATCTCGTGAGAAGATAAGAATGAAAACAGATGATATCCATATGGAGTCACAGGGAAAACCTGAGCTCTCTGAAAACTCTTTCTCCTTGAGAGAAAGAAAAGAGAACTCATGGCATCATGCTGAAGCTGCCAGAGCAGTCACTTCTAAATCAAAGCCAACTCAAAAAGTGCCACCCATTACTATCCATCTAGCAGACAACATCATGCTGGCTGATCAAGAACCAGAGCCAAAAGGATCTCCAGTGCTGGAATATGAAGCTGAGGGCAATGAGGTTGTGTTGATTCCAATGGAACACAACACATGTCAATTTGACATAGCCCTGAGAGATGACAATATGGAAGCATTTTATGCTGCCCTCCATGCTGAGACCTATGCTCCACCATCACCTTTAGCATTAGGAGATACTAGAGATGATTCAAAATTGGCTTATCCTCAAATGAGTGAAGGAACCAAGAAAGCCTTGGAAATCCTGAAAGAAATCCTCTCCAAACAATTTTGTCATGTTCTGGACCCACCATCATCCACATCTATGAAAACTACCTTAGATTATCTTTGTACTTTATTTGCAGATGAATATGATGATGTCTCTCTGAGTTTGAAGTCTCTAATACTACAACTTTCAGCTGACTTTACCCAGTGGAGTTGGGACTACATTGATGCAAGCATGAAACTTGAGTCCTCAACTACAGGCCTATCAAAATTAGATACATTAGAAGAGAGTCTTAAAGCTAACAAGAACCAGTTTAGTGAATTTGTGTCCATAGAAAATGAGTTGGGCAGCCAGTTGGCTTATTTGGAAGAAAGAATGAAAGAGCTGGAAGAGCAAATTAATGCCATTAAATCCAACATCTCTATCTCTACAGTGGCTAGAGACACTGCTCTTAGAAAGAAAAGAGAAACCTTTGAGGATGGAAGAGTGTTGAAAGCTCAAAGAGATGAGTTGAGGAAAAGAAGGCCGCGCTTGAGAGCTGAGCTAGAATCAGCAAAAGCTACCAAAGCAAACATTGAGGATGAATGGTCAAATATTAGAGAGAAATTTTATAGAATCTTCAACGTGTATGGGTTAGACTATTGA 4812 0.3842 MAHHVAASSSSFSFSHGWVYHVFLSFRGADTRETFTGNLYNALDQRGINTFIDDEELRIGEEISPSLLRAIEESRIAIIIFSKNYATSTWCLDELVKILECKKEKGQVVCSVFYNVDPSDVRHQKGSYEEAFVKHEKRFKHNKEKLQKWRSALFEAANLSGWHFSNGYEFKFIQRIVDEVSSKLNRIPLNVARYPVGLQARVSDVTLLLELGCEDVRMVGIYGIGGIGKTTIAKAVYNSVYDQFRYASFLANVRENASHRAGLVKLQERLLFEILGEKTIKLGNVDRGINIIKDRLCRKSVLLVLDNVDDVEQLQALAGGFDWFGPGSRIIITTRDKHLLTAHQVDLTYEVKKLNHFEALQLFSWNAFKRSEPDARYFDISNRAVCYAEGLPLALNILGSDLCGRSIHQWESALDKYKRTPNRKVQDILKISFDGLEENEKEIFLYIACFFKGEIMEYATKALRACDLHPAIGIAVLVDKSLITLDERHVLSMHDLIQDMGKEIVRQESPLDPGKRSRLWYYEDVLQVLTEGMGSDKIQGIMLNLPEKQEVQIKTQDLKKMKNLRMLIVRNAEFFGGHVHLPSNLRLLDWEEYPSPCLPFDFLPDKIVMLELRHSHLTLDKPFKKYANLTSLNFSSCEFLTKLPDVSGIPNLEQLILEDCKGLVEIHESLGSLDKLVYLGVERCNELKNLPSVLKLPSLGCIALNGCSQLEKFPALLGKMDNLRIIEAEETAIQELPSNVVNFNSLEILILKHCSNLKELPKTIDMLPNLQLLDISGCPKLQLFPEKLSCFSTQNCSTMLRESNGSSSNLELLPAPCVDLVSPGIQSSYGFPLLESLDLSDCNLSDEDLHILSCFSNLISLDISRNHFETLPKCFNKLSSLQELYMANCRNLQQISGIPPNLEHIDATSCTLLNSQSLSLLLSQGFQKASKFEVIAPRPRILMPFNYHSKEGSMSFLIGQKFPRIALCFSFGLGNKRIGFFTCEVQLSINGQKASNRVQHFLSVFGDLAWLYHQEDLMDLDTYLLHEQNYVEISCEIIDASKAAEVMIYSCGVHEYKEDEEMKKPNLILCTSSSPNNTKLGCNDFLHDTQFSRESPENHCQYDDTLGIDCCSLPENLRLYEISHEKIQQLSASINPEMLEGNDYMAQNKGNTTYIMLADTMHQSKEMSSLHLQLYGDSTWDPMLLECQLNCMNETQLVPNYCRTSENKGKKESETEVGLTLARALIPPTKAGAKAYENVVLKEDLESREKIRMKTDDIHMESQGKPELSENSFSLRERKENSWHHAEAARAVTSKSKPTQKVPPITIHLADNIMLADQEPEPKGSPVLEYEAEGNEVVLIPMEHNTCQFDIALRDDNMEAFYAALHAETYAPPSPLALGDTRDDSKLAYPQMSEGTKKALEILKEILSKQFCHVLDPPSSTSMKTTLDYLCTLFADEYDDVSLSLKSLILQLSADFTQWSWDYIDASMKLESSTTGLSKLDTLEESLKANKNQFSEFVSIENELGSQLAYLEERMKELEEQINAIKSNISISTVARDTALRKKRETFEDGRVLKAQRDELRKRRPRLRAELESAKATKANIEDEWSNIREKFYRIFNVYGLDY. 1604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05453 1603 Pfam NB-ARC domain 215 423 IPR002182 GO:0043531
Seca9g05453 1603 Gene3D - 188 349 IPR027417 -
Seca9g05453 1603 SMART till_3 19 159 IPR000157 GO:0007165
Seca9g05453 1603 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Seca9g05453 1603 Gene3D Ribonuclease Inhibitor 542 728 IPR032675 -
Seca9g05453 1603 PRINTS Disease resistance protein signature 218 233 - -
Seca9g05453 1603 PRINTS Disease resistance protein signature 765 781 - -
Seca9g05453 1603 PRINTS Disease resistance protein signature 388 402 - -
Seca9g05453 1603 PRINTS Disease resistance protein signature 295 309 - -
Seca9g05453 1603 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 715 IPR044974 GO:0006952
Seca9g05453 1603 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Seca9g05453 1603 Pfam TIR domain 20 188 IPR000157 GO:0007165
Seca9g05453 1603 Gene3D Ribonuclease Inhibitor 729 935 IPR032675 -
Seca9g05453 1603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Seca9g05453 1603 Coils Coil 1557 1591 - -
Seca9g05453 1603 Coils Coil 1501 1528 - -
Seca9g05453 1603 Gene3D - 353 437 IPR042197 -
Seca9g05453 1603 SUPERFAMILY L domain-like 493 926 - -
Seca9g05453 1603 Pfam Leucine rich repeat 833 889 IPR001611 GO:0005515
Seca9g05453 1603 Gene3D - 14 187 IPR035897 -
Seca9g05453 1603 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 162 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05453 Seca-Chr9 161553390 161560616 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05453 14 786 WRKY Transcription Factor Family AT4G12020 31.579 1.01e-93 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05453 - - lja:Lj0g3v0340619.1 2309.64