Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05445 ATGGAATTTAACAAGGACTTTATGGACGGTTGTTCTACAATTTGGACTGATGAAAATTCTGAAAGCGACCGAGAGCAGTCACCTAATGGGGATGGGAACCAGGTGGGAGACGAATCTGAGCTGTCATGGGGCGGGAGGATGATACATGAACTAAAACATGATGACATTAGACATCTGGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGAATTATGCCAAGCATCGAGGGTTTGTTGTGAGGAAAGATGATGTTGAGCGTAATGAGAATAGTGATATTGTTAAGCGAAATTTAGTGTGTAATAAGGAGGGAACAAGGGACAAGAAATACTTGCAGAGAATGGACAGAGTGAGGGAGGAGAGGCCAATTACTCGTGTGCAGCACAACAAGGATGTGTGTTTACTTAGATTTGAGGAATGGGAAATGGAAGGTGTCTGCATTCGACGATGA 456 0.432 MEFNKDFMDGCSTIWTDENSESDREQSPNGDGNQVGDESELSWGGRMIHELKHDDIRHLEFGSEGEAYSFYSNYAKHRGFVVRKDDVERNENSDIVKRNLVCNKEGTRDKKYLQRMDRVREERPITRVQHNKDVCLLRFEEWEMEGVCIRR. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05445 151 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 128 - -
Seca9g05445 151 Pfam FAR1 DNA-binding domain 69 129 IPR004330 -
Seca9g05445 151 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05445 Seca-Chr9 161454817 161455272 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05445 FAR1 4.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05445 - - ccaj:109792835 101.679