Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05425 ATGGCTCTGTTACCATCCTCTTCCTCTTCCTCTTCCTCTTCATTCACTTACGATGTGTTTCTCAGCTTCAGAGGCGAGGACACTCGCTACAATTTTACTGGCAATCTCTACAAAGCTCTTTATGATAGAGGAATCTGCACCTTCATTGATGACGAGGAGCTTCAAAAAGGGGAGGAAATTACACCATCACTTCTCAAGGCCATTGAAGAGTCTAAGATTGCCATCATTGTGCTCTCTAAGAATTATGCATCTTCATCATTTTGCTTGGATGAACTTTCCAAGATTCTTGATAGCATTAAGGGAAAGGGTCGACTGGTTTTGCCGGTATTTTATGATGTGGACCCTTCTGATGTACGAAAGCTGACGGGGACTTATGGAGAAGCAATGGCTAAGCTTGAGGAGCGGTTCAAGGATGACATGCGGAGATTGCAAAATTGGAAGATGGCTTTACAACAAGTGGCTAGCTTGTCCGGTTGGCATTTCAAACTTGGGAAAGAATATGAACACGAGTTTATTGAGAAGATTGTTGAGAAAGTCTCAAGCGAGATTAAACCCATTACTTTAGCGGTTGATAATTACCTAGTTGGATTGGAGACCAAAAAGCAAGATGTAATATCTCTTTTAGATGTTGGGTCTGATGATAAAGTCCACATGCTAGGGGTTCATGGAATTGGTGGAATAGGTAAAACAACTCTTGCTGTAGCAGTTTATAATTTGATTTCCCACCAATTTGAACGTTCATGCTTTCTTGCAAAAGTCAGAGAAAATTCAGAGAAGCGTGAATTACTAGATCTCCAAAAGAAACTTCTTTTTGAATTAACTGGGGAGGAAAAAATTGAGTTAACATCTGTCATGCAAGGAATTTCAATAATGCAACAAAGATTACAACACAAGAAGATTCTTTTGATTCTAGATGATGTTGACAAGCGGGAGCAATTAGTGGCTCTTGTTGGAAAACAATGTTTTAGTCCTGGCAGTAGAGTCATTATCACCACTCGGGACAAACACTTGCTAACATATCATGAAGTTGAAAGTACATATGAGGTGAAGGAGCTGAACAAGAAAGATGCTTTTGAATTGCTTAAATGGAAAGCTTTTAAAACTGACAAAGTTTGTTCAAGTTATGTGAACATTTTAAAACGTGCTGTAAATTATGCTTCTGGTCTTCCGTTGGCTTTGGAAATAGTAGGTTCTCACTTGTTTAAGAAAAGTTTAGAGGAATGGAAATTTACATTAGATCGGTATGAAAGGATTCCTAATAATGAGATCCAAAATATTCTTAAAGTAAGTTTTGATGCTTTGGATCAATCAGAGAGAAGTGTTTTTCTTGACATTGCTTGTTGTTTTAAAGGATACCGCTTGGAAAAGGTTGAAGGAATACTTCATGCTCATCATGGTGAGAGCAAGAAACATCACATAAGAGTGTTGGTTGAAAAATCTATCATAAAGATTGAGTCTGGTTATGTCACTTTACATGACTTAATAGAGGATATGGGGAAAGAAATTGTCCGACAAGAATCGCCAGAAGATCCTGGAAAACGGAGTAGATTATGGTTTTCTAATGATATAACTCAAGTTTTAGAAAAAAATTCGAAGTTCGAGAACATGAGAGTTTTAAATATATATCATTGTGAATTAAGACAGATACCTGACGTATCTGGTCTCCCAAACTTAGAAGAATTTTCATTTGAAGATTGGAAGAATTTAACTAGAATTCACAAATCGGTTGGATTATTAGATAAACTTAAAATCTTGAGTGCTCGAGGTTGTAGCAAGCTCAAGAGTCTTCCGCCCCTGGAATTGGCCTTTCTTGAACAACTTAATCTTTCATTTTGTGAAAGTCTTAAGAGTTTTCCACCCATGGTTGGGTCACTGGATAAACTCAAAATCTTGCATGCTGAACGTTGCAAGAAGCTTAGGAGTTTTCGACCCCTCAAGTTGCCCTCTCTTGAAGAGCTCTATCTTTCAAGTTGTAGTAGTCTTGAGAGCATTTCACCCATAGTTGGGTCACTGGATAAACTCAAAGTCTTGCATGTTGAACGTTGCGAGAAGCTTAGGAGTTTTCCACCCCTCAAGTTGCCCTTTCTTGAACAACTTCATCTTGCATTTTGTGAAAGTCTTGAGAGTTTTCCACCCATTGTTGGGTCACTGGATAAACTCAAAATCTTGCATGCTGAACGTTGCAAGAAGCTCAGGAGTTTTCCACCCCTCAAGTTGCCCTCTCTTGAAGAGCTCTATCTTTCAAGTTGTAGTAGTCTTGAGAGCATTTCACCCATGGTTGGGTCACTGGATAAACTCAAAATCTTGAGACTTGACAATTGCCAGAAGCTCAGGAGTTTTCCACCACTCAAGTTGCCCTCTCTTGAAGGGCTTCATCTTTCATATTGTAGTAGTCTTGAGAGCATTTCACCAATGGTTGGGTCACTGGATAAACTCAATCTTACATGCTAG 2451 0.388 MALLPSSSSSSSSSFTYDVFLSFRGEDTRYNFTGNLYKALYDRGICTFIDDEELQKGEEITPSLLKAIEESKIAIIVLSKNYASSSFCLDELSKILDSIKGKGRLVLPVFYDVDPSDVRKLTGTYGEAMAKLEERFKDDMRRLQNWKMALQQVASLSGWHFKLGKEYEHEFIEKIVEKVSSEIKPITLAVDNYLVGLETKKQDVISLLDVGSDDKVHMLGVHGIGGIGKTTLAVAVYNLISHQFERSCFLAKVRENSEKRELLDLQKKLLFELTGEEKIELTSVMQGISIMQQRLQHKKILLILDDVDKREQLVALVGKQCFSPGSRVIITTRDKHLLTYHEVESTYEVKELNKKDAFELLKWKAFKTDKVCSSYVNILKRAVNYASGLPLALEIVGSHLFKKSLEEWKFTLDRYERIPNNEIQNILKVSFDALDQSERSVFLDIACCFKGYRLEKVEGILHAHHGESKKHHIRVLVEKSIIKIESGYVTLHDLIEDMGKEIVRQESPEDPGKRSRLWFSNDITQVLEKNSKFENMRVLNIYHCELRQIPDVSGLPNLEEFSFEDWKNLTRIHKSVGLLDKLKILSARGCSKLKSLPPLELAFLEQLNLSFCESLKSFPPMVGSLDKLKILHAERCKKLRSFRPLKLPSLEELYLSSCSSLESISPIVGSLDKLKVLHVERCEKLRSFPPLKLPFLEQLHLAFCESLESFPPIVGSLDKLKILHAERCKKLRSFPPLKLPSLEELYLSSCSSLESISPMVGSLDKLKILRLDNCQKLRSFPPLKLPSLEGLHLSYCSSLESISPMVGSLDKLNLTC. 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05425 816 Coils Coil 129 149 - -
Seca9g05425 816 PRINTS Disease resistance protein signature 218 233 - -
Seca9g05425 816 PRINTS Disease resistance protein signature 294 308 - -
Seca9g05425 816 PRINTS Disease resistance protein signature 386 400 - -
Seca9g05425 816 PRINTS Disease resistance protein signature 645 661 - -
Seca9g05425 816 Gene3D Ribonuclease Inhibitor 645 734 IPR032675 -
Seca9g05425 816 Gene3D Ribonuclease Inhibitor 513 644 IPR032675 -
Seca9g05425 816 Gene3D Ribonuclease Inhibitor 735 816 IPR032675 -
Seca9g05425 816 Pfam NB-ARC domain 198 428 IPR002182 GO:0043531
Seca9g05425 816 SMART till_3 16 156 IPR000157 GO:0007165
Seca9g05425 816 Gene3D - 182 346 IPR027417 -
Seca9g05425 816 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Seca9g05425 816 Pfam TIR domain 17 185 IPR000157 GO:0007165
Seca9g05425 816 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Seca9g05425 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 445 IPR027417 -
Seca9g05425 816 Gene3D - 351 435 IPR042197 -
Seca9g05425 816 Gene3D - 9 181 IPR035897 -
Seca9g05425 816 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Seca9g05425 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 539 IPR044974 GO:0006952
Seca9g05425 816 SUPERFAMILY L domain-like 514 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05425 Seca-Chr9 161039565 161042653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05425 216 815 WRKY Transcription Factor Family AT5G45050 30.612 1.87e-55 206