Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05424 ATGGCTCATCTACCAACCTCTTCCTCTTTCTCTTCATTCACTTATGAAGTGTTTCTCAGCTTCAGGGGCGAGGACACCCGCTATAATTTTACTGGCAATCTCTATGACGCTCTATTTCGCAGGGGAATCCACACTTTCATGGATGAGGAGGACCTTCAGAAAGGGGATGAAATCACACCATCACTTCTCAAGGCCATTGAAGGGTCTAGGATTGCCATCATTGTGCTCTCTAAGAACTATGCATCTTCATCATTTTGCTTGGATGAACTTTCCAACATTCTTGATAGCATTAAGGGAAAGGGTCGACTGGTTTTGCCGGTATTTTATGACGTGGACCCTTCTCATGTACGAAAGCTGACGGGGACTTATGGAGAAGCAATGGCTGAGCTTGAGGAGAGGTTTAAGGATGACATACAGAGATTGCAAAATTGGAAGATGGCTCTGCATAAAGTGGCTAATTTGTCCGGTTGGCATTTCAAGCTTGGGGATGGATATGAACACAAGTTCATTGCAAAGATCGTTGAACAAGTCTCAAGAGAGATTAAACCTGTTACTTTAGCTGTTCATAATTACCTAGTTGGACTGGAGACCAAAAAGCAACATGTAACATCTCTTTTAGATGTTGGGTCTGATGATAAAGTCCACATAGTAGGGATTCATGGAATTGGCGGTATAGGTAAAACAACCCTTGCTCGAGCAGTTTATAATTCGGTTGCTGACCATTTTGAAGGTATGTGTTTTCTTGAAAATGTTAGAGAAAATTCAAAGAAAGATGGGTTACCGCACATCCAAAATATCATTCTTTCTGAAATAGTCCGAGAGAAGGAAATTAAGTTAACAAATGTCAAACAAGGAATTTCAATAATACAACAGAGATTACAACGCAAGAAGATTCTTTTGATTCTAGATGATGTTGACAAGCGGGAGCAATTAGAGGCTCTTGCTGAAAGACAATGCTTTGGTCCTGGTAGTAGAGTTATTATCACCACGCGGGAAAAACACTTGCTAACATATCATGAAGTCGAAAGTACATATGAGGTGAAGGAGCTGAACACGAAAGATGCTTTTGAATTGCTTAAATGGAAAGCTTTTAAAACCGACAAAGTTTGTTCAAGTTATTTGGACATTTTAAACCGTGCAGTAACTTATGCTTCTGGCCTTCCGTTGGCTTTGGAAGTAATAGGTTCCCACTTGTTTAAGAAAAGTGTAGAAGAATGGAAATCTGCATTAGATCGGTATGAAAGGATTCCTAATAATGAGATCCAAAATATTCTTAAAGTAAGTTTTGATGCTTTGGATCAATCAGAAAAAAGCGTTTTTCTTGACATTGCTTGTTGTTTTAAAGGATACCGCTTGGAAAAGGTTGAAGGAATACTTCATGCTCATTATGGTGAGAGCAAGAAACATCACATAGGAGTGTTGGTCGAAAAATCTATTATAAAGATTGAGTTTGGTTGTGTGACATTACATGACTTGATAGAGGATATGGGGAAAGAAATTGTACGACAAGAATCACCAGAAAATCCTGGAAAGCGGAGTAGATTATGGTTTTCTAATGATATAATTCAAGTTTTAGAAAAAAATTCGGGAACCGATAAAATTGAAATCATACACATGAATTATTCCTCAATTGGAGAGGCTTTGAAGAAGATTGTAAACCTCATAAAATGGGATGGAGAGGCTTCGAAGAAGATGGAAAACCTCAAAAAATTGAAGATGGAAAACCTAAGAAAATGGAATGGAGAGGCTTTGAAGAAGATGGAAAACCTCATAAAATGGGATGGAGAGGCTTTGAAGAAGATGGAAAACCTCAGAACACTTATTGTTAGAGATGGTGGTTTTTCCGAAAATCCAAAATATCTTCCAAAATGCTTAAGAGTGCTGGAATGGCGATCACGTAATCTACCATTTGATTTTCATATGATGAAGTTCGAGGACATGAGAGTTCTAAATATATATGACTGTGAATTACAACAGATACCTGACATATCTGGTCTCCCAAACTTAGAAGAATTTTCATTTAAAAATTGGAAGAATTTAACTGAAATTCACAAATCGGTTGGGTTATTAGGTAAACTTAAAATCTTGAGAGCTCAAGGTTGCAGCAAGCTGAGGAGTTTTCCACCCCTGGAATTGCCCTCTCTTGAACAACTCAATCTTTTAGATTGTTATAGTCTTGAGAGTTTTCCACCTGGGCTTGGGTTGTTGGGAAAACTGAAAATCTTAAGAGCTTCATATTTCAACAAGCTCAAGAGTTTTCCACCACTAGAGTTAACCTCTCTTGAACAACTGTATCTTTCATATTGTGATAATCTTGAGAGTATTTCACCCATGGTTGTGTCACTGGATAAACTCAAAATCTTGGATGTTGTAGGTTGCAAGAAGCTCAGGAGTTTTCCACCACTCAAGCTGCCCTCTCTTGAAATGCTCAAACTTTCAGATTGTAGTAGTCTTGAGAGCTTTCCAGAAATATTAGGAAAGATGGAAAATATAACACAACTTCACTTGGAAAACACTCCCATAAAAGAATTGCCATATTCCTTTAAAAATCTTACTAGGCTCCAAACATTATATATGGAGAAATGTGGGATGGTTCAGCTACCAAGTAGCATTGTCATGATGTTAGAACTGGCAAAGCTTACCATTAAGGATGGGGGATGGCGACTCCCAAGACAAGAGGGTGGAGAAAAAGTTAGCTCAATGCATTCTTCAAAAGTAGAATTTCTTCAACTCTTGAACTGCAACCTTTCTGGGTCTTTGGCAATAGGTTTCAAGTGGTTTGCTAATGTGAAAGAATTAGACCTATCAGGGAATCAATTCACAATTCTTCCTGAATGCATCCAAGAATTCCACTTTTTATGGATGCTTAGAATGGATAAGTGCAAGGAACTTCAGGAAATTGGAGGGCTTCCACCAAGCTTAAAATCTCTTAGTTTGGATTATTGCGAGCAACTTGAGGAAATTAGAGAGATTCCGCCGAGCTTAAAAACTTTCTCAGCCTTAAACTGTGCATCCTTGACTTCCTCATGCAAACGCAAGTTATTGAATCAGGAACTGCATGAGGCTAGAAACACCAATTTTCGTCTGCCACAATCATTCAATGTTCCACACTGGTTCGATCACCAGAGAAATAAACAATCAATTTCTTTCTTGTTTCGTAATAAATTCCCTGCCTTAATTCTCTGTGTTGCTACAAAGACGTGGAGGCACTATGGTTCTATAATTGTAACCATCAATGGCAGTTCATTTTCCTATAAGGATTCAGAGCATAAAGAAAAGCCGTTTGAATCGGGTCATCATTTGCATCTTTTTCATATGCAAATGGAAAATTTCAATGATAATATGGACATAGCACTTTTAGAAGATGAGTGGAACCTTGCAGATGTTAGGATAGATGATAAATCCCTAATCCGTATGTGGGGAATCCATGTATTGAAAGAGAAAAGTAGCATGGAGGATATTCAACTCACCGATGAGAGATCTCCCATAATAGAATTGCCATTTTCATTTCAAAATCTTTGTCGGCTCCAAATATTACATTTGGGTGATTGTGGAATTGTTCAGTTACCAAGTAGCATTGTCATGTTGCGAGATTTGGCTAAGCTTACCATTGAGGATGGGGGATGGCTATTCCCAAAACAAGATGAGGGTGAAGAAAACAGAAGCGTGATGTTGTCTTCAAATGTAAAATATCTTCATCTCAAAAAATGCTTCCTTTTAGATGAATCTTTGGCAGTAGGTCTCAAGTGGTTTGCTAATGTGAAAGAATTAGACATATCAGAGAGTCAATTCACAATTCTTCCTGAATGCATCAAAGAATGGGCTTTTCTACAAAAGCTCAATTTAAATTACTGCAGGGAACTTCAGGAAATTAGAGGGATTCCACCAAGCTTAAAATCTCTTAGTTTGGATAATTGCAGGGAACTTCAGGAAATTGGAGAGATTCCACCAAACTTAGAATCTCTTAGTTTGGATAATTGCAAGAAACTTAAGCAAATTAGTGGGATTCCACGAAGCTTAAAAACATTCTCTGCATTAAATTGCCAATCCTTGACTTCCTCTTTGAAAAGCGAGTTACTGAATCAGGAACTGCATGAGGCTGGAAACACCTGGTTCCGTTTGCCACGAGTTTGGATTCCAGAGTGGTTTGACCACAGGTGCATGCAAGGACTGTCAATTTCTTTGTGGTTTCGTAACAAGTTCCCTGCCATAGTTCTCAGTGTTGTCTCTCCATTAACATGGAAAGGCTCTCATATATTCGTGACCATCAATGGCAATAAATTTTCTTGTAGAGTTCCTGGGAGTGAATATTTGCGTCCAGAAACGTATCATTTACATCTTTTTCATATGCAAATGGAAAACTTTGATGACAATCTGGACAAAGCACTTCTAGAAAATAAGTGGAACCACATGGAGGTTGACTTTACATTCGCATTCCAGCAAAGTGGAATCCATGTGTTGAAAGAGAAAAGTAGCATGGAGGATATTCGATTCACAGATCCTCATAAAAAGAGAAAATTAGATGCTGATCTCAATTGTCCACAATCATAA 4551 0.3819 MAHLPTSSSFSSFTYEVFLSFRGEDTRYNFTGNLYDALFRRGIHTFMDEEDLQKGDEITPSLLKAIEGSRIAIIVLSKNYASSSFCLDELSNILDSIKGKGRLVLPVFYDVDPSHVRKLTGTYGEAMAELEERFKDDIQRLQNWKMALHKVANLSGWHFKLGDGYEHKFIAKIVEQVSREIKPVTLAVHNYLVGLETKKQHVTSLLDVGSDDKVHIVGIHGIGGIGKTTLARAVYNSVADHFEGMCFLENVRENSKKDGLPHIQNIILSEIVREKEIKLTNVKQGISIIQQRLQRKKILLILDDVDKREQLEALAERQCFGPGSRVIITTREKHLLTYHEVESTYEVKELNTKDAFELLKWKAFKTDKVCSSYLDILNRAVTYASGLPLALEVIGSHLFKKSVEEWKSALDRYERIPNNEIQNILKVSFDALDQSEKSVFLDIACCFKGYRLEKVEGILHAHYGESKKHHIGVLVEKSIIKIEFGCVTLHDLIEDMGKEIVRQESPENPGKRSRLWFSNDIIQVLEKNSGTDKIEIIHMNYSSIGEALKKIVNLIKWDGEASKKMENLKKLKMENLRKWNGEALKKMENLIKWDGEALKKMENLRTLIVRDGGFSENPKYLPKCLRVLEWRSRNLPFDFHMMKFEDMRVLNIYDCELQQIPDISGLPNLEEFSFKNWKNLTEIHKSVGLLGKLKILRAQGCSKLRSFPPLELPSLEQLNLLDCYSLESFPPGLGLLGKLKILRASYFNKLKSFPPLELTSLEQLYLSYCDNLESISPMVVSLDKLKILDVVGCKKLRSFPPLKLPSLEMLKLSDCSSLESFPEILGKMENITQLHLENTPIKELPYSFKNLTRLQTLYMEKCGMVQLPSSIVMMLELAKLTIKDGGWRLPRQEGGEKVSSMHSSKVEFLQLLNCNLSGSLAIGFKWFANVKELDLSGNQFTILPECIQEFHFLWMLRMDKCKELQEIGGLPPSLKSLSLDYCEQLEEIREIPPSLKTFSALNCASLTSSCKRKLLNQELHEARNTNFRLPQSFNVPHWFDHQRNKQSISFLFRNKFPALILCVATKTWRHYGSIIVTINGSSFSYKDSEHKEKPFESGHHLHLFHMQMENFNDNMDIALLEDEWNLADVRIDDKSLIRMWGIHVLKEKSSMEDIQLTDERSPIIELPFSFQNLCRLQILHLGDCGIVQLPSSIVMLRDLAKLTIEDGGWLFPKQDEGEENRSVMLSSNVKYLHLKKCFLLDESLAVGLKWFANVKELDISESQFTILPECIKEWAFLQKLNLNYCRELQEIRGIPPSLKSLSLDNCRELQEIGEIPPNLESLSLDNCKKLKQISGIPRSLKTFSALNCQSLTSSLKSELLNQELHEAGNTWFRLPRVWIPEWFDHRCMQGLSISLWFRNKFPAIVLSVVSPLTWKGSHIFVTINGNKFSCRVPGSEYLRPETYHLHLFHMQMENFDDNLDKALLENKWNHMEVDFTFAFQQSGIHVLKEKSSMEDIRFTDPHKKRKLDADLNCPQS. 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05424 1516 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 732 IPR044974 GO:0006952
Seca9g05424 1516 Gene3D - 349 433 IPR042197 -
Seca9g05424 1516 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 157 IPR035897 -
Seca9g05424 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 443 IPR027417 -
Seca9g05424 1516 SUPERFAMILY "Winged helix" DNA-binding domain 419 526 IPR036390 -
Seca9g05424 1516 SUPERFAMILY L domain-like 903 1306 - -
Seca9g05424 1516 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 183 - -
Seca9g05424 1516 Gene3D Ribonuclease Inhibitor 1145 1366 IPR032675 -
Seca9g05424 1516 Gene3D Ribonuclease Inhibitor 817 1026 IPR032675 -
Seca9g05424 1516 Coils Coil 127 147 - -
Seca9g05424 1516 SMART till_3 14 154 IPR000157 GO:0007165
Seca9g05424 1516 Pfam TIR domain 15 184 IPR000157 GO:0007165
Seca9g05424 1516 PRINTS Disease resistance protein signature 292 306 - -
Seca9g05424 1516 PRINTS Disease resistance protein signature 216 231 - -
Seca9g05424 1516 PRINTS Disease resistance protein signature 802 818 - -
Seca9g05424 1516 PRINTS Disease resistance protein signature 384 398 - -
Seca9g05424 1516 Gene3D - 180 344 IPR027417 -
Seca9g05424 1516 ProSiteProfiles TIR domain profile. 13 181 IPR000157 GO:0007165
Seca9g05424 1516 Gene3D Ribonuclease Inhibitor 498 816 IPR032675 -
Seca9g05424 1516 Pfam NB-ARC domain 196 429 IPR002182 GO:0043531
Seca9g05424 1516 SUPERFAMILY L domain-like 589 875 - -
Seca9g05424 1516 Gene3D - 14 179 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05424 Seca-Chr9 161030304 161035476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05424 736 882 WRKY Transcription Factor Family AT4G12020 40.000 1.50e-14 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05424 - - mtr:25479587 1024.23