Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05415 ATGGCAGGTTTAGCATCCTCCTTCTCTTCCTTCACCTACGATGTATTCCTCAGCTTCAGAGGTTCAGATACTCGCCACGGTTTCACTGGTTTTCTCTACAAAGCTCCTCATGACAGCGGCATCCACACCTTCATCGATAACGAGGAGCTTCACGGAGGGGATGAAATAGCACCATCACTTGTAAGGGCAATTAAGGAGTCTAGGATTGCCATCATTGTTCTCTCTAACAACTATGCATCTTCCACATTTTGCTTAGATGAACTTTCCAATATTATTGATTGCATTAAGAGGAAAGGTCGGTTGGTTTTGCCTTTTTTCTATTGTGTGGATCCTTCTGATGTGAGATATCAGAGAGGGCCTTATGGTGAAGCATTGGCTAGGCATGAGGAGAAGTTCAAGGATAATAAGGGGAAGGAGCAGTTACAGGCTATTGTTGGAAGAGCTGACTGGTTTGGTCCTGGTAGTAGAGTCATCATCACGACTCGGGACAGACACTTACTAGCATGTCACAATGTTGAAAGAACATATGAGGTAAGCTTTGATGCTTTGGGGGAAGACGAGCAGTGTGTTTTTCTTGATATTGCTTGTTGCTTCAATAGATATGAATTGGTAGAGGTCATAGGTATACTTCGTGCTCATTATGGTGAATGCATGAAACATCATATTGCAGTTTTGGTTGAAAAGTATCTTCTAAAGATTAGTTGGGATAATAAAGTGACACTACATGATTTGATAGAGAAGATGGGTAAAGAAATTGTCCGACAAGAATCACCAAAAGAGCCAGGGAAGCGCAGTAGGTTATGGTTCCCTAAAGATATAGTTCAAGTTTTGGAAGAAAATACGGGAACTACTGAAATTGAAATCATATATTTGGATTCCATCTTATTTGAAGAAGTAGCAATAGAGTGGAATGGAAAGGCATTCAAGAAGATGAAAAATCTCAAGACACTTATTATTAGAAATGGTCGTTTTTCCAAGAGTCCCCAATACCTTCCAAATAGTTTAAAAATATTAGAATGGTGGAGATATCCTTCACAGTATTTACCATCTGATTTTCATCCAAAGAAACTTGTCATATGCAAGTTACCCAATAGTTACTTCACGTCACTCGAGTTGGCTGACTTAATGAAGGCAAATAAGTTCGTGAATTTGAGAGTTTTGAATGTTGACGACACTAAATGTTTAACACAAATACCTGATCTATTAGGTCTTCGAAATTTAGAAAAGTTGTCATTTCGGTATTGTGAGAATTTAATCACAATTCATGATTCAGTTGGGTTCTTGGATAAACTTAAAATCTTGAATGCTAAGTATTGCAACAAGCTTAGGAGTTTTCCACCCATCAAGTTGACATCTCTTCAACAACTTGAACTTTCAAATTGTGATAGTCTTGTGAGGTTTCCTGAAATATTAGGAAAGATGGAAAACTTAACAAGACTTTATTTGAAGAAAACTCCCATAAAAGAACTGCCATTCTCATTTCGAAATCTTACTAGACTCCGAAGATTATGTTTGACTGATTGTGGAGTTGTTCAGTTACCATGTAGCATTATCATGATGTCAGAATTGACTGAGATTATGGCTTGGGGATGGCAAGGGTGGCTATCACCAAAACAAGATGGGGGTAAAGAAAAAGTTAGCTCAATGGTGTCTTCAAATGTAGATCGTCTTCATCTCTCAAGCTGCAATCTGTCAAATGAATTTTTTCTAGTAGGTCTCGCATGGTTTGCTAATGTGAAGCATTTAAATCTATCGTGTAATAATTTCACAATTCTTCCTGAATGCATCAAAGAATGTCACTTATTGAGGAAGCTTAATTTAAATTATTGTCATCACCTTCTTGAAATTAGAGGGATTCCACCAAACTTGGAACATTTCTCTGCAGCAAACTGTAAATCCTTGACTTGCTCAAGTAGAAGCATGCTACTGAATCAGGAACTACATGAGGCTGGAAACACCGAGTTTTATTTGCCAGGAGCAACAATTCCAAAGTGGTTCGAGCATCAAAGCAGGGGATCATCAATTTCTTTTTGGTTTTGGGACAAGTTCCCTACCATATCTCTCTGTCTTGTTATTGGACATTATTTTAATTTTATGTTTGGTAGTCCCACCATCATCATCAATGGAAAACAACCATTTTTTGAACATCAATGGAGTGAAGACTATTTCTCAATGGAAAGGCGTCATACTTATCTTTTTGACCTACAGAAGATAAAATTGGAAGATAATCTAAATGAAGCACTTCTAGAAAATGAATGGAACCATGCAGTGTTTACTTATAAGGATGGGCATGAGATACCAATACTTTTAGAAAGTGGAATCCATGTATTCACACAAGAAAGTAGCATGGAGGATATTCGATTCACCGATCCTTATAAAAAGAGAAAAGTAGATGCTGATCTCAATTGTTCACAATCATAA 2421 0.3751 MAGLASSFSSFTYDVFLSFRGSDTRHGFTGFLYKAPHDSGIHTFIDNEELHGGDEIAPSLVRAIKESRIAIIVLSNNYASSTFCLDELSNIIDCIKRKGRLVLPFFYCVDPSDVRYQRGPYGEALARHEEKFKDNKGKEQLQAIVGRADWFGPGSRVIITTRDRHLLACHNVERTYEVSFDALGEDEQCVFLDIACCFNRYELVEVIGILRAHYGECMKHHIAVLVEKYLLKISWDNKVTLHDLIEKMGKEIVRQESPKEPGKRSRLWFPKDIVQVLEENTGTTEIEIIYLDSILFEEVAIEWNGKAFKKMKNLKTLIIRNGRFSKSPQYLPNSLKILEWWRYPSQYLPSDFHPKKLVICKLPNSYFTSLELADLMKANKFVNLRVLNVDDTKCLTQIPDLLGLRNLEKLSFRYCENLITIHDSVGFLDKLKILNAKYCNKLRSFPPIKLTSLQQLELSNCDSLVRFPEILGKMENLTRLYLKKTPIKELPFSFRNLTRLRRLCLTDCGVVQLPCSIIMMSELTEIMAWGWQGWLSPKQDGGKEKVSSMVSSNVDRLHLSSCNLSNEFFLVGLAWFANVKHLNLSCNNFTILPECIKECHLLRKLNLNYCHHLLEIRGIPPNLEHFSAANCKSLTCSSRSMLLNQELHEAGNTEFYLPGATIPKWFEHQSRGSSISFWFWDKFPTISLCLVIGHYFNFMFGSPTIIINGKQPFFEHQWSEDYFSMERRHTYLFDLQKIKLEDNLNEALLENEWNHAVFTYKDGHEIPILLESGIHVFTQESSMEDIRFTDPYKKRKVDADLNCSQS. 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05415 806 Pfam C-JID domain 657 726 IPR045344 -
Seca9g05415 806 Pfam TIR domain 13 136 IPR000157 GO:0007165
Seca9g05415 806 Gene3D - 10 155 IPR035897 -
Seca9g05415 806 SUPERFAMILY L domain-like 256 651 - -
Seca9g05415 806 SMART till_3 12 148 IPR000157 GO:0007165
Seca9g05415 806 ProSiteProfiles TIR domain profile. 11 145 IPR000157 GO:0007165
Seca9g05415 806 SUPERFAMILY "Winged helix" DNA-binding domain 172 278 IPR036390 -
Seca9g05415 806 Gene3D Ribonuclease Inhibitor 272 531 IPR032675 -
Seca9g05415 806 Gene3D Ribonuclease Inhibitor 532 668 IPR032675 -
Seca9g05415 806 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 134 167 IPR044974 GO:0006952
Seca9g05415 806 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 129 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05415 Seca-Chr9 160953389 160958284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05415 176 530 WRKY Transcription Factor Family AT4G12020 36.119 1.06e-43 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05415 - - gmx:100780257 744.191