Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05414 ATGGCTCTGTTACCATCTCGTTCCTGCTTCACTTACAATGTGTTTCTTAGCTTTAGAGGCGAGGACACTCGCTATGGTTTTATTGGCCATCTCTACAAAGCTCTTCGTGACAAAGGAATAGACACTTTCATTGATGAGGAGGGTGTTAAAAAAGGGGAGGAAATCACACCATCACTTCTCAAGGCCATTGAAGAGTCCAAGATTGCCATCATTGTGCTCTCTAAGAATTATGCATCTTCATCATTTTGCTTGGATGAACTTTCCAAGATTCTTGATAGCATTAAAGTAAAGGAGCGACTGGTTTTGCCGGTATTTTATGATGTGGACCCTTCTGATGTACGAAAGCTAAGGGGGACTTATGGAGAAGCCATGGCTAAGCATGAAGAGAGGTTCAAAGATAATACGGAGAAATTGCAAAAATGGAAGATGGCTCTACAGCAAGTGGGTAGCTTGTCCGGTTGGCATTTCAAGCTTGGGAAAGAATATGAACACGAGTTTATTGAGAAGATAGTTGAGAAAGTCTCAAGGGAGATTAAACACATTACTTTAGTGGTTGATAATTGCCTAGTTGGACTGGAAACCAAAAAGCAAGATGTAATATCTCTTTTAGATGTTGGGTCTGATGATAAAGTCCACATGCTAGGGGTTCATGGAATAGGTGGAATAGGTAAAACAACACTTGCTGTAGTAGTTTATAATTTGATTTCCCACCAATTTGAACGTTCATGCTTTCTTGAAAAAGTCAGAGAAAATTCAGAGAAGCATGAAGAATTACTACATCTCCAAAAGAAACTTCTTTTTGAATTAGCTGGAGAGGATACAATTCAGTTAACATGTGTCATGCAAGGAATTTCAATGATGCAACAAAGGTTACAACACAAGAAGATTCTTTTGATTCTAGATGATGTTGACAAGCGGGAGCAATTAGTTGCTCTTTCTAGAAGACAATGCTTTGGTCCTGGCAGTAGAGTTATTATCACCACACGGGACAAACACTTGCTAACATGTCATGAGGTTGAAAATACATATGAGGTGAAGGAGCTGAACAAGAAAGATGCTTTTGAATTGCTTAAATGGAATGCTTTTAAAACTGACAAAGTTTGTTCAAGATATGTGGACATTTTAAACCATGTAGTAACTTATGCTTCTGGCCTTCCGTTGGCTTTGGAAGTTATAGGTTCTCACTTGTTTAAGAAAAATTTAGAAGAATGGGAATCTGCATTAGATGGGTATAAAAAGATTCCAAATAAAGAGATCCAAAATATTCTTAAATTAAGTTTTGATGCTTTGGATCAATCAGAGAAAAGTGTTTTTCTTGACATTGCCTGTTGTTTTAAGGGATACCGTTTGGAAAAGGTTGAAGGAATACTTCATGCTCATCATGGTGAGAGCAAGAAACATCACATAAGAGTGTTGATTGAAAAATCTATTATAAAGATTAATGAGCATGGTAGCGTGACATTACATGACTTAATAGAGAATATGGGGAAAGAAATTGTTCGACAAGAATCACCAGAAGATCCTGGAAAACGAAGTAGATTATGGTTTCCTAATGATATAATTCAAGTTTTAGAAAAAAATTCGAAGTTTGAGAACATGAGAGTTTTAAATATATATGAGTGTGAATTAAGACAAATACCTGACGTATCTGGTCTCCCAAGCTTAGAAGAATTTTCATTTGAATATTGGAAGAATTTAACTAGAATTCACAAATCGGTTGGGTTATTAGATAAACTTAAAATCTTGAGTGCTGAACGTTGCAGCAAGCTGAGGAGTTTTCCACCACTGGAATTGCCCTCTCTTGAAGAACTCAATCTTTCATTTTGTTCTAGTCTTGAGAGTTTTCCACCCGGGCTTGGGTTGTCGGGAAAACTTAAAATCTTAAGAGCTTCACATTGCAACAAGCTCAAGAGTTTCCCACCACTAGAGTTAACCTCTCTTGAAGAGCTCCATCTTTCATTTTGTAGACATCTTGAGAGTATTTCACCCATGGTTGGGTCACTGGATAAACTCAAAATCTTGGATGTTGAAGGTTGCAGAAAGGTCACTAGTTTTCCACCCCTGGAATTGCCCTCTCTGGAAGTGCTCAAACTTTCATATTGTTATAGTCTTGAGAGCTTTCCAGAAATATTAGGAAAGATGGAAAATATAACACAACTTCACTTGGTAAACACTCCCATAAAAGAATTTCCATTTTCATTTCAAAATCTTACTAGGCTCCAAACATTATATATGGAGAAATGTGGAATGGTTCAACTACCAAGTAACATTGTCATGATGTCAGAATTGGCAAAGCTTACCATTAAGGGTGAGGGATGGCTACTCCCAAGACAAGAGGGTGTAGAAAAAGTTAGCTCAATGCATTCTTCAAATGTAGAATTTCTTCAGCTCTTGAACTCAAACCATTCAGATGAATCTTTGGCAATAGGTCTCAAGTGGTTTGCTAATGTGAAAGAATTAGACCTATCAGGGAATCAATTCGCAATTCTTCCTGAATGCATCAAAGAATTCCACTTTTTATGGATGCTTAGAGTGGATAACTGCAAGAAACTCAAGGAAATTAGAGAGCTTCCGCCAAGCTTAAAATCTCTTAGTTTGGATTATTGCGAGCAACTTGAGGAAATTAGAGAGATTCCGTCAAGCTTAAAAACTTTGTCAGCCTTAAACTGTGCATCCTTGACTTCCTCGTGCAAATGCAAGTTATTGAATCAGGAACTGCATGAGGCTAGAAACACCAATTTTCGTCTGCCACAATCATTCAATGTTCCACACTGGTTCGATCACCAGAGAAATACACAATCAATTTCTTTCTTGTTTCGTAATAAATTCCCTGCCCTAATTCTCTGTGTTGCTACAAAGACATGGAGGCACTATGGTTCTATAATTGTAACCATCAATGGCAGTTCATTTTCCTATAAGGATTCAGAGCATAAAGAAAAGACGTTTGAATCGTATAATCATTTGCATCTTTTTCATATGCAAATGGAAAATTTCAATGATAATATGGACATAGCACTTTTAGAAGATGAGTGGAACCTTGCAGAGGTACCAAGTAGCATTGTCATGTTGCAAAATTTGGCTAAGCTTACCATCGAGGATGGGAGATGGCTATTCCCAAAACAGGATGAGGGTGAAGAAAACAGGAGTGTGATGTTGTCTTCAAATGTAAAATGTCTTCGTCTCAAAAGATGCTTAGTTTTAGATGAATCTTTGGCAATAGGTCTCAAGTGGTTTGCTAATGTGAAAGAATTAGACCTATCGGGGAGTCAATTCACAATTCTTCCTGAATGCATCAAAGAATGGGCTTTTCTACAGAAGCTTAGTTTTGATAATTGCAGGGAACTTCAGGAAATTAGAGGGATTCCACTCTGCTTGAAAACTTTCTCTGCCTTAAACTGCCAGTCCTTGACTTCCTCTTGGAAAAGCAATTTACTAAATCAGGAACTGCATGAGGCTGGAAATACTAGTTTCCGTTTGCCACGAGTTAGGATTCCAGAGTGGTTTGACCACCAGTGCATGCAAGGACTGTCAATTTCATTGTGGTTTCGTAACAAGTTCCCTGCCATAGTTCTCTGTGTTGTCTCTCCATTAACATGGTCATACTCTCATATATTCGTGACCATCAATGGCAATAAATTTTCTTATAGGGTTGCTGAGAATAAATTTAAGTGTCCAGAAACGTACCATTTACATCTTTTTCATATGCAAATGGAGAACTTTGATGACAATCTGGACAAAGCACTTCTAGAAAATAAGTGGAACCACATGGAGGTTGACTTTAGATTCCCATTCCAGCAAAGCGGAATCCATGTATTGAAAGAGAAAAGTAGCATGGAGGATATTCTATTCACCATTCCAGAGAATGATGGAATTGGATCAGCTTTACCAATTCTGAGACTCCACCATGCAATTATAGTATGCCTACAAAGACAACTCATGTGCATTGTGTTCAGGCGAGATGTTGAACATGGGAGAGGCAGGCTAAGAGCTGGATCTTGGTGCAGTGGCCGCTGGCCTGCTGTCGCTGCATGTCTGGGTTCTATTTTGTAA 4050 0.3817 MALLPSRSCFTYNVFLSFRGEDTRYGFIGHLYKALRDKGIDTFIDEEGVKKGEEITPSLLKAIEESKIAIIVLSKNYASSSFCLDELSKILDSIKVKERLVLPVFYDVDPSDVRKLRGTYGEAMAKHEERFKDNTEKLQKWKMALQQVGSLSGWHFKLGKEYEHEFIEKIVEKVSREIKHITLVVDNCLVGLETKKQDVISLLDVGSDDKVHMLGVHGIGGIGKTTLAVVVYNLISHQFERSCFLEKVRENSEKHEELLHLQKKLLFELAGEDTIQLTCVMQGISMMQQRLQHKKILLILDDVDKREQLVALSRRQCFGPGSRVIITTRDKHLLTCHEVENTYEVKELNKKDAFELLKWNAFKTDKVCSRYVDILNHVVTYASGLPLALEVIGSHLFKKNLEEWESALDGYKKIPNKEIQNILKLSFDALDQSEKSVFLDIACCFKGYRLEKVEGILHAHHGESKKHHIRVLIEKSIIKINEHGSVTLHDLIENMGKEIVRQESPEDPGKRSRLWFPNDIIQVLEKNSKFENMRVLNIYECELRQIPDVSGLPSLEEFSFEYWKNLTRIHKSVGLLDKLKILSAERCSKLRSFPPLELPSLEELNLSFCSSLESFPPGLGLSGKLKILRASHCNKLKSFPPLELTSLEELHLSFCRHLESISPMVGSLDKLKILDVEGCRKVTSFPPLELPSLEVLKLSYCYSLESFPEILGKMENITQLHLVNTPIKEFPFSFQNLTRLQTLYMEKCGMVQLPSNIVMMSELAKLTIKGEGWLLPRQEGVEKVSSMHSSNVEFLQLLNSNHSDESLAIGLKWFANVKELDLSGNQFAILPECIKEFHFLWMLRVDNCKKLKEIRELPPSLKSLSLDYCEQLEEIREIPSSLKTLSALNCASLTSSCKCKLLNQELHEARNTNFRLPQSFNVPHWFDHQRNTQSISFLFRNKFPALILCVATKTWRHYGSIIVTINGSSFSYKDSEHKEKTFESYNHLHLFHMQMENFNDNMDIALLEDEWNLAEVPSSIVMLQNLAKLTIEDGRWLFPKQDEGEENRSVMLSSNVKCLRLKRCLVLDESLAIGLKWFANVKELDLSGSQFTILPECIKEWAFLQKLSFDNCRELQEIRGIPLCLKTFSALNCQSLTSSWKSNLLNQELHEAGNTSFRLPRVRIPEWFDHQCMQGLSISLWFRNKFPAIVLCVVSPLTWSYSHIFVTINGNKFSYRVAENKFKCPETYHLHLFHMQMENFDDNLDKALLENKWNHMEVDFRFPFQQSGIHVLKEKSSMEDILFTIPENDGIGSALPILRLHHAIIVCLQRQLMCIVFRRDVEHGRGRLRAGSWCSGRWPAVAACLGSIL. 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05414 1349 SUPERFAMILY L domain-like 507 768 - -
Seca9g05414 1349 SMART till_3 11 151 IPR000157 GO:0007165
Seca9g05414 1349 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 180 - -
Seca9g05414 1349 Gene3D - 9 174 IPR035897 -
Seca9g05414 1349 Gene3D - 175 342 IPR027417 -
Seca9g05414 1349 Gene3D Ribonuclease Inhibitor 776 943 IPR032675 -
Seca9g05414 1349 ProSiteProfiles TIR domain profile. 10 178 IPR000157 GO:0007165
Seca9g05414 1349 SMART LRR_typ_2 530 553 IPR003591 -
Seca9g05414 1349 SMART LRR_typ_2 644 668 IPR003591 -
Seca9g05414 1349 SMART LRR_typ_2 737 760 IPR003591 -
Seca9g05414 1349 SMART LRR_typ_2 1078 1101 IPR003591 -
Seca9g05414 1349 SMART LRR_typ_2 814 837 IPR003591 -
Seca9g05414 1349 SMART LRR_typ_2 598 622 IPR003591 -
Seca9g05414 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 441 IPR027417 -
Seca9g05414 1349 Gene3D Ribonuclease Inhibitor 639 775 IPR032675 -
Seca9g05414 1349 Pfam TIR domain 12 181 IPR000157 GO:0007165
Seca9g05414 1349 PRINTS Disease resistance protein signature 382 396 - -
Seca9g05414 1349 PRINTS Disease resistance protein signature 290 304 - -
Seca9g05414 1349 PRINTS Disease resistance protein signature 596 612 - -
Seca9g05414 1349 PRINTS Disease resistance protein signature 213 228 - -
Seca9g05414 1349 SUPERFAMILY RNI-like 1012 1145 - -
Seca9g05414 1349 Pfam NB-ARC domain 193 422 IPR002182 GO:0043531
Seca9g05414 1349 Gene3D Ribonuclease Inhibitor 488 638 IPR032675 -
Seca9g05414 1349 Gene3D Ribonuclease Inhibitor 975 1167 IPR032675 -
Seca9g05414 1349 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 640 IPR044974 GO:0006952
Seca9g05414 1349 Gene3D - 347 431 IPR042197 -
Seca9g05414 1349 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 154 IPR035897 -
Seca9g05414 1349 Pfam C-JID domain 1159 1272 IPR045344 -
Seca9g05414 1349 SUPERFAMILY L domain-like 689 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05414 Seca-Chr9 160939154 160949685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05414 509 810 WRKY Transcription Factor Family AT4G12020 29.375 5.75e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05414 - - gmx:100780257 939.488