Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05407 ATGGCTCTGTTACCATCATCTTCCTCTTCCTTCTTCACCTATCGATTCTCCTACCAAGTGTTCCTCAGCTTTAGAGGCACTAATACTCGCTATGGTTTTACTGGTTATCTCTACAAAGCTCTTGATGACAAGGGAATCTGTACTTTCACTGATGAGGAGGAACTTCAAAAGGGGGAAGAAATCACACCATCACTTCTCAAGGCCATTGAAGGGTCTAGAATTGCTATCATTGTGCTCTCTAAGAACTATGCATCTTCATCATTTTGCTTGGATGAACTTTCTAAGATTCTTGACTGCATTAACGAAAAGGGTCGGTTGGTTTGGCCAGTTTTTTATAATGTGGACCCTTCTGATGTTCGAAGACTAAATGGGTCTTTTGGAGAAGCAATGACTAAGCATGAGGAGAGGTTCAAGGATGACAAGGAGAAATTGGAAAAATGGAAGATGGCTCTGCAGAAAGTGGCTAACTTGTCTGGTTGGCATGTCAAGCATGGCAATGATACATATGAACACGAATTTGTCACAAACATTGTCGAAGAGGTCTCAAAAAAGATTAAACGTGTGGCTTTACCTATTGCTGATTACCCGGTTGGATTGGAATCTCCAATTCTGAATGTAATTAAGCTTCTGGATGTCGGATCGTCTGATGATAGATGTCACATGGTAGGGATTTATGGAATTGGTGGTATAGGTAAAACAGCCCTTGCTCTAGCTGTTTATAATTCGGTCGCTGACCATTTTGAAGGTGTGTGTTTTCTTGAAAATGTTAGAGAAACTTCACAGAAAGATGGGTTAATGCACATCCAAAAGACCATTCTTTCTGAAATAGTTGGAGAGAAGGAAATTCAGTTAACAAGTGTCAAACAAGGAAGTTCAATAATACAACAGAGACTCCAGAAAAAGAAGGTTCTTTTGATTCTAGATGATGTTGACAACCGGAAGCAATTAGAGGCTATTGCTGGAAGTCCTGAATGGTTTGGTCTTGGCAGTCGAGTCATTATCACAACGCGGGACAAACAATTACTTGCATGTCACCAAGTTGAAAGTATATATGAGGTAGAGGAGTTGAACAAGGAAGATGCTCTTGAATTGCTAAAATGGAAAGCTTTTAAAACTAACGAAGTTGATCCAAGTTATGTCGACATTTTCAACGATGTTGTGGGTTATGCTTCTGGACTCCCGTTGGCCTTGGAAGTAATAGGTTCCCACTTGTGTGGAAAAAGCATAGAAGAATGGAAATCTGCATTGGATCAATATAAAAGGATTCCTAATGATGAGATCCAACAGATACTTCAAGTGAGCTTTATTGCTTTGGGGGAAGAAGAGAGAAGTGTTTTTCTCGACATTGCTTGTTGTTTGAAAGGATATGGTTTGGTAAAAGTTGAGGAAATACTGTGTGCTCATTATGGTGGCTGCATGAAACATCACATTGGAGTGTTGGTTGATAAATCACTCATAAAAACTCATTGGTATCGTGTGGACATGCATGACTTGATAGAGTATATGGGTAAAGATATTGTTAGAAAAGAATCACTGAAACACCCTGGGAAACGTAGTAGGTTGTGGTCTCCAACAGATATAGTTGAAGTTTTAGAAGAAAATACGGGAACTGCTGAGATTGAAATGATATGTTTAAATTTCTCCTTGTCTGGAGAAGTAGAATGGGATGGAGAGGCTTTCAAGCAGATGAAAAAGCTTAAAACACTTATTATTAAATATGGTCATTTTTCCAAAGGTCCTAAATATCTTCCTAACAGTTTAAAAGTACTGGAATGGCGGAGCTATCCTTCACATGTTTTACCATCTGATTTTCATCCAAAGAAACTTACAATATTTGGGTTGTTAGATAAACTTAAAGTACTGAATGCTGAAGATTGTAGCATGCTTGGAAATGTCCCACCTCTCAAGTTGACCTCTCTTGAAAGTCTCCATCTTTCAGGTTGCAAGAGCCTCGTGAGTTTTCCAGAAATATTAGTCGAGATGAAAAATATATCAGAGCTTGAATTGTATGACATTAACATAAAAGAATTTCCATTTTCATTTTGTAATCTTAGTCGGCTTCAATCTTTAAGTTTTAGAGACTTTGGAACTAGTTTTCAATTACCAAGTAGCATTTATATGATGTCAAAGCTGGTTGAGATTTCTTTCAAAAATGACCGCTCAAATTTAAGGGGAGTCATACCATTGATAAAAGAGGATGAGGGTGAAGAAAAAGTAAGCTCAATGCTGTCTTCAAACTTACAACGTCTTCGAATCCGCCAGCCGTGGTCAAACAACCTATTAGATGAATTTTTGGCAATATGTCTCCAGTGTTTTGCAAAGATAAAAGAATTAAACCTATCAGAGAGTGATATCACAATTATTCCTGAATGCATCAAAGAATGTCACTTTTTATGGAAGCTTAACTTGTATGGTTGCAACCGACTTCAAGAAATCAGAGGGATTCCGCCAAACTTAAAATATTTATCTGCAAAGAGATGTTATTCATTGAGTGCCTTGAGTAGAAGCATGTTACTGAAAAAGGAAGTGCATGAGGCTGGAGACACTTATTTTCATTTGTCAAGCCCAAAGCAGGGAAGGATTCCAGAGTGGTTCGAGCACCAGAAAATGGGACTGTCAACTTCTTTCTCCTTCCGTAACAAGTTCCCTCACATTGCTCTCTGTCTTGCTCAAAGGAGCGAAGGATTCCATAGTGCTTTAGTCGACGACATGTCTGGTTTTAGGGTAGATGTGATCATCAACGACAAGAAGTTTAAATGTTTGCATTGCTATTCTGATGATACGCTATTTAATAGCTATCTTTTTCATATGGTAACGGTGGATGAAGCACTTTTAGAAAATGAGCGGAGCCATGCAAACAATCAATTCTCATTCCTTAAAAGATTCGATGAAGATTATGTATCGAAAGAGGAATGTAGAAATATGAAGGGAAGAGTACTAATGGGAGAGTATGATCATAATATAGACGAAGCACTTTCTCAAAATGACTGGAACCATGTGAAGATTAAGGTAACCATGGAAGACCCACGTCTAATCTTTATGGAAATTGGAATCCATGTATTGGAAGAGAAAAATAGCATGGAGGATATTTGTTTCCCCGATCATAAGGATAACATTGAAACTGTCGACCAATTATCAAGTATCCTTTTCATGGGGACAGAGCTCAATGCTGCCAAGGGAAAGGAGGTTGAAGAAAGATTAAGGTCAATGTTGTCTTCAAACTTTGAATATCTTGACCTCTCAGGCTGCCACCTGTCAGATCAATGTTTCCCAATGGGTCTCCTTGGGTTTCCTAACTTGAAAGAATTGAACCTATCCAAGAATGACATCACATTTGTTCCTAATTGCTTCAAAGAATTCCACTTTTTATGGAAGCTTCAATTGGATTATTGTGAAAAACTTGAAGACATTAAAGGGATTCCCCCAAGCTTAAGATACTTATCTGCAAAAGGATGCAAATCCTTGGACAACATGTATTTTTCGTTTAGCATAGAATTGTTACTGAATCAGGAACTGCATGAGGGTAGAAACACTGAATTTTATTTGGCAAGCCCAATCTATACAGAAAAGATTACAGAGTGGTTTGAGCACCGGAGAATGGGATTATCAACTTCTTTCTGGTTCCGTAACAAATTTCCTCACATAGCTCTTTGTCTTGATCACTTTTGTGGAAACAAATCTGGGTTTTTTGATGTAGTTGTGATCATTAACGGCAAGCAGTTTCCATGTATGAAGCAATTTCCATCGGATGAGGTGCGTCACATATATCTTTTTCATATGTTAACAGTTGATGAAGCACTTTTAGAAAATGAGTGCAGCCATGCAAACAATGAATTCCCATTCCTTACAAGAAACGGAGTCCCTCTATCTAAAGAGGAATGTACTTCTATAAAGGGAAGAGTACTAATGGGAGAAAACCATCATAATCTGGATGAAGTACTCTTACAAAATGAGTGGAACCATGTGGAGATTAAGATAATCAGTGACGTCCTGATCTTTATGGAAATTGGAGTCCATGTATTCAAAGAGAACAATAGCATGGAGGATATTTGTTTATCCTATCATATGTGGAATTTAAATAACATTGAAACTGTCGACCAATTATCAAGTATCATTTTCATGGGGGCAGAGCTCAATGCTGATATTGATATTGATGAGGTTGAAGAAAGATTAAGGTCAATGTTGTCTTCAAACTTTGAATATCTTGACCTCTCAGGCTGCCACCTGTCAGATCAATGTTTCCCGATACGTCTCCTTGGGTTCCCTAACTTGAAAGAGTTGAACCTATCAAAGAATGACTTCACATTTGTTCCTAATTGCTTCAAAGAATTCCACTTTTTATGGAAGCTTGAATTGGATTATTGCGAAAAACTTGAACACATTTTTGAGATCCCCCCAAGCTTAAGATACTTATCCACAAAAGGATGCCGATACTTGTCCAACAAGTCTATAGACGAGTTACTGAAACAGAAACTGCATGATGCTGGAACAATTCCAGAGTGGTTTGAGCACCAGAAAATGGGACAGTCAACTTCTTTCTCCTTCTGTAGCAAGTTCCCTCACATTGCTCTCTCTCTTGCGAGTTACTCTTGTTGTGTAAGCGGAAATTTTAATGTAGACGTGATCATCAACGACGAGAAGTTTGTATGTTTGCATTCCTTTACTTGGGTCAATGAGAAGTGTCATACATATCTTTTTCATATGGTAACGGTGGATGAAGCACTTTTAGAAAATGAGCGGAGCCATGCAAACAATCAATTCCCATTCCTTATAAAACTATTCGATGAATACCCCCATTGCAAACTGATCCCTCTGTCGAAAGAGGAATGTACAGATATGAAGGGTAGAGTACTAATGGGAGAGTATGATCATAATATAGACGAAGCACTTTCTCAAAATGACTGGAACCATGTGGAGATTAAGGTCGAATTGCATGAGGCTGGAAACACTTATTTATGTTTGCCAACAATATGGATTCCAGAATGGTTTGAGCACCAGAGAATGGGATCGTCAACTTCTTTCTGGTTTCGTAACAAGTTCCCACCACACATAGCTCTTTGTCTTGCTCTTTTTTGTCCACCAACATTGAGGTGTTTTCATGTAATTGTGATCATCAATGACAGGGAATTTGAATATAAGGAGGACTTTGGATTCGATAATGAGCTAATGGAAAAATTATACTTTGGATCCGATTATGAGCTGCTGCGTAATACATTTCTTTTTCATGTGCTAATGGAAAAATTCAAGTTTGATGAAGCACTTTTAGAACATGAGTGGAACCATGTGGAGATTAAGATACACTCTGATTCCCCGATCGAGGTAGAAATTGGAATCCATGTATTTAAAGAGAAAGGTAGCATGAACGATATCTGTTTTACGGAACCTTGCACAAAATCAGATTTCAACTTGGCATTACTTCCAGAAAATGATTCAAAGAGAAAAACAGCAGACTTGAACTTGGCACAACTTCAAGAGAATGATGCAAAGAGGAGAAAATTAGACTTGAACTTGCAACCACCCCTAGAAGATGATGTTTAA 5538 0.3814 MALLPSSSSSFFTYRFSYQVFLSFRGTNTRYGFTGYLYKALDDKGICTFTDEEELQKGEEITPSLLKAIEGSRIAIIVLSKNYASSSFCLDELSKILDCINEKGRLVWPVFYNVDPSDVRRLNGSFGEAMTKHEERFKDDKEKLEKWKMALQKVANLSGWHVKHGNDTYEHEFVTNIVEEVSKKIKRVALPIADYPVGLESPILNVIKLLDVGSSDDRCHMVGIYGIGGIGKTALALAVYNSVADHFEGVCFLENVRETSQKDGLMHIQKTILSEIVGEKEIQLTSVKQGSSIIQQRLQKKKVLLILDDVDNRKQLEAIAGSPEWFGLGSRVIITTRDKQLLACHQVESIYEVEELNKEDALELLKWKAFKTNEVDPSYVDIFNDVVGYASGLPLALEVIGSHLCGKSIEEWKSALDQYKRIPNDEIQQILQVSFIALGEEERSVFLDIACCLKGYGLVKVEEILCAHYGGCMKHHIGVLVDKSLIKTHWYRVDMHDLIEYMGKDIVRKESLKHPGKRSRLWSPTDIVEVLEENTGTAEIEMICLNFSLSGEVEWDGEAFKQMKKLKTLIIKYGHFSKGPKYLPNSLKVLEWRSYPSHVLPSDFHPKKLTIFGLLDKLKVLNAEDCSMLGNVPPLKLTSLESLHLSGCKSLVSFPEILVEMKNISELELYDINIKEFPFSFCNLSRLQSLSFRDFGTSFQLPSSIYMMSKLVEISFKNDRSNLRGVIPLIKEDEGEEKVSSMLSSNLQRLRIRQPWSNNLLDEFLAICLQCFAKIKELNLSESDITIIPECIKECHFLWKLNLYGCNRLQEIRGIPPNLKYLSAKRCYSLSALSRSMLLKKEVHEAGDTYFHLSSPKQGRIPEWFEHQKMGLSTSFSFRNKFPHIALCLAQRSEGFHSALVDDMSGFRVDVIINDKKFKCLHCYSDDTLFNSYLFHMVTVDEALLENERSHANNQFSFLKRFDEDYVSKEECRNMKGRVLMGEYDHNIDEALSQNDWNHVKIKVTMEDPRLIFMEIGIHVLEEKNSMEDICFPDHKDNIETVDQLSSILFMGTELNAAKGKEVEERLRSMLSSNFEYLDLSGCHLSDQCFPMGLLGFPNLKELNLSKNDITFVPNCFKEFHFLWKLQLDYCEKLEDIKGIPPSLRYLSAKGCKSLDNMYFSFSIELLLNQELHEGRNTEFYLASPIYTEKITEWFEHRRMGLSTSFWFRNKFPHIALCLDHFCGNKSGFFDVVVIINGKQFPCMKQFPSDEVRHIYLFHMLTVDEALLENECSHANNEFPFLTRNGVPLSKEECTSIKGRVLMGENHHNLDEVLLQNEWNHVEIKIISDVLIFMEIGVHVFKENNSMEDICLSYHMWNLNNIETVDQLSSIIFMGAELNADIDIDEVEERLRSMLSSNFEYLDLSGCHLSDQCFPIRLLGFPNLKELNLSKNDFTFVPNCFKEFHFLWKLELDYCEKLEHIFEIPPSLRYLSTKGCRYLSNKSIDELLKQKLHDAGTIPEWFEHQKMGQSTSFSFCSKFPHIALSLASYSCCVSGNFNVDVIINDEKFVCLHSFTWVNEKCHTYLFHMVTVDEALLENERSHANNQFPFLIKLFDEYPHCKLIPLSKEECTDMKGRVLMGEYDHNIDEALSQNDWNHVEIKVELHEAGNTYLCLPTIWIPEWFEHQRMGSSTSFWFRNKFPPHIALCLALFCPPTLRCFHVIVIINDREFEYKEDFGFDNELMEKLYFGSDYELLRNTFLFHVLMEKFKFDEALLEHEWNHVEIKIHSDSPIEVEIGIHVFKEKGSMNDICFTEPCTKSDFNLALLPENDSKRKTADLNLAQLQENDAKRRKLDLNLQPPLEDDV. 1846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05407 1845 PRINTS Disease resistance protein signature 297 311 - -
Seca9g05407 1845 PRINTS Disease resistance protein signature 221 236 - -
Seca9g05407 1845 PRINTS Disease resistance protein signature 635 651 - -
Seca9g05407 1845 PRINTS Disease resistance protein signature 390 404 - -
Seca9g05407 1845 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 160 IPR035897 -
Seca9g05407 1845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 704 IPR044974 GO:0006952
Seca9g05407 1845 Gene3D Ribonuclease Inhibitor 541 870 IPR032675 -
Seca9g05407 1845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 449 IPR027417 -
Seca9g05407 1845 Gene3D - 183 351 IPR027417 -
Seca9g05407 1845 SMART till_3 17 157 IPR000157 GO:0007165
Seca9g05407 1845 Gene3D - 355 438 IPR042197 -
Seca9g05407 1845 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 187 - -
Seca9g05407 1845 SMART LRR_typ_2 1421 1443 IPR003591 -
Seca9g05407 1845 SMART LRR_typ_2 1097 1119 IPR003591 -
Seca9g05407 1845 ProSiteProfiles TIR domain profile. 16 185 IPR000157 GO:0007165
Seca9g05407 1845 Pfam NB-ARC domain 206 421 IPR002182 GO:0043531
Seca9g05407 1845 Pfam Leucine Rich Repeat 1099 1119 IPR001611 GO:0005515
Seca9g05407 1845 Pfam Leucine Rich Repeat 1423 1443 IPR001611 GO:0005515
Seca9g05407 1845 Gene3D - 15 182 IPR035897 -
Seca9g05407 1845 ProSiteProfiles Leucine-rich repeat profile. 1099 1120 IPR001611 GO:0005515
Seca9g05407 1845 Pfam TIR domain 18 186 IPR000157 GO:0007165
Seca9g05407 1845 Gene3D Ribonuclease Inhibitor 1341 1533 IPR032675 -
Seca9g05407 1845 Gene3D Ribonuclease Inhibitor 1033 1173 IPR032675 -
Seca9g05407 1845 SUPERFAMILY L domain-like 497 1490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05407 Seca-Chr9 160905319 160912355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05407 12 767 WRKY Transcription Factor Family AT4G12020 27.155 3.82e-62 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05407 - - gmx:100780257 991.104