Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05358 ATGGCACGAGGAGCACCATCTTCTCCTCCTTTTACCAACACATACACTTACGATGTCTTTCTTAGTTTTCTTGGTGAAGATACACCTACTGGTTTTACCAATCGATCAATGGGGAATTATAGAGAAGCATTAGCAAATCATGAAGAAAGATTTAAAGATGACAAAGACAAGGTCCAAAAGTGGAGGGAAGAAAATGAGCATGTGTTAATTACAAAGATCATAGAAGAAATTATTTCCCTCATGCTTAATCTCTTAAATGTTGCTAATTACTCTGATGGATTGGAAGCTCGAATGCGAGATATAAAATCGTTTAAAGTTAGCTATGATGGCTTGGAGGAAAATGAGAAGGAAATTTTTCTTGACATAGCTTGCTTCTTTCAAGGATTCACTATAAGATATGTTACAAATATGTTAAATGGTCGTGGTTTTCATCAAGCACAACATGGTATCGAGACGCTAAGTAAAAAATCTCTTATTAATATTTGGAGATCTGTTGAATATGATGATGACATTGTGACAATGCATTCCCTGATTCAACATATGGGAAAAGAACTAGTGAGGCAACAATCAACTTCACCTGAAGAACGTAAAAGGTTGCGGTTTTACGAGGATGTTATTGGCGTTTTGGAGAAAAATAAGGAAAATGATAAAATTGAAGCTATGGTGTTGAATATCCCTGAAGATAAAGAGGCTCAATGGAATGAAGAGGTGTTTGGAAAGATGCAAAGCCTCAAGATGCTTATAAAAAAGAAAGATTGCTTTTTGGAAAGCCCCAAACATCTCCCGAGCAGTTTGAGAGTGTTGGAATGGTGGGGATATCTTGAAGCTTCTTTACCATCTAATTTTCCTTCAAAGAATCTTATCATACTTAATTTGTCACACAGTTTCTTTCAGTGGGACAAACAACTAGAGGCACGTATTATTATTTCCATTGTAATAAATAACTTTGTTTTTAATAATATGACACTTAATTGTTGA 978 0.3507 MARGAPSSPPFTNTYTYDVFLSFLGEDTPTGFTNRSMGNYREALANHEERFKDDKDKVQKWREENEHVLITKIIEEIISLMLNLLNVANYSDGLEARMRDIKSFKVSYDGLEENEKEIFLDIACFFQGFTIRYVTNMLNGRGFHQAQHGIETLSKKSLINIWRSVEYDDDIVTMHSLIQHMGKELVRQQSTSPEERKRLRFYEDVIGVLEKNKENDKIEAMVLNIPEDKEAQWNEEVFGKMQSLKMLIKKKDCFLESPKHLPSSLRVLEWWGYLEASLPSNFPSKNLIILNLSHSFFQWDKQLEARIIISIVINNFVFNNMTLNC. 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05358 325 Gene3D - 102 184 IPR036388 -
Seca9g05358 325 SUPERFAMILY "Winged helix" DNA-binding domain 104 209 IPR036390 -
Seca9g05358 325 Coils Coil 44 64 - -
Seca9g05358 325 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 95 297 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05358 Seca-Chr9 159502539 159513002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05358 104 295 WRKY Transcription Factor Family AT4G12020 36.816 3.80e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05358 - - var:108344061 269.24