Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05351 ATGGAATTTGCTGTTGAAGTTGAGATATTGGCAATAGTACGACACAAGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGTCATGAATGGTTAATTGTATATGACTATATGCCAAATTTGAGCCTGTTCTCTCATCTTCATGGACAGCATTCAGCAGAATCCCTTCTTGATTGGAATCGACGTATGAATATTGCAATTGGATCTGCTGAGGGAATTGTATATCTTCACCACCAAGCAACACCACATATCATCCACAGGGATATTAAAGCAAGCAATGTTCTGTTGGATTCAGATTTCCAAGCAATGACTTTATCCTCTTATACTAATTTCCCATTTAGTGAAGTCTCAAATAATAATTTGGAAGAAAAAACTTATTTTCTATAA 387 0.3592 MEFAVEVEILAIVRHKNLLSLRGYCAEGHEWLIVYDYMPNLSLFSHLHGQHSAESLLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQAMTLSSYTNFPFSEVSNNNLEEKTYFL. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05351 128 SUPERFAMILY Protein kinase-like (PK-like) 2 102 IPR011009 -
Seca9g05351 128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Seca9g05351 128 PANTHER OS01G0253100 PROTEIN 1 103 - -
Seca9g05351 128 SMART tyrkin_6 1 128 IPR020635 GO:0004713|GO:0006468
Seca9g05351 128 Gene3D Transferase(Phosphotransferase) domain 1 39 125 - -
Seca9g05351 128 Pfam Protein tyrosine and serine/threonine kinase 2 99 IPR001245 GO:0004672|GO:0006468
Seca9g05351 128 Gene3D Phosphorylase Kinase; domain 1 1 38 - -
Seca9g05351 128 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05351 Seca-Chr9 159421923 159422386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05351 1 103 Receptor kinase-like Gene Family AT1G60800 51.456 1.57e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Seca9g05351 PK_Tyr_Ser-Thr 4.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05351 - - lja:Lj3g3v0044340.1 195.282