Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05328 ATGGCAACTAGACTTCAATTTGAGAATTCTTGTGAAGTTGGAGTGTTCTCTAAACTTACCAATGCCTATTGTTTGGTTGCCATTGGAGGTTCTGAAAACTTCTACAGTGTATTTGAAGCTGAGTTCGCAGATGTTATCCCTGTGGTCAAGACATCCATTGGTGGCACTCGTATTATTGGTCGTCTTTGTGCTGGAAACAAGAATGGGCTCCTCTTGCCCCATACCACCACAGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCACGTTGTTGTTCAGCGGATAGAAGAAAGATTGTCTGCTCTAGGAAATTGTATAGCATGTAATGACCATGTGGCCCTCACTCACACTGATCTTGACAGGGAGACTGAGGAGATGATTGCTGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACGATTGCTGGTAATATTCTTGTTGGTAGTTACTGTGCCTTCTCCAATAGAGGTGGTTTGGTGAGTAAAAGATGTTTTTTTCCTTGA 507 0.426 MATRLQFENSCEVGVFSKLTNAYCLVAIGGSENFYSVFEAEFADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDHVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVSKRCFFP. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05328 168 CDD IF6 2 161 IPR002769 GO:0042256|GO:0043022
Seca9g05328 168 Gene3D - 1 165 - -
Seca9g05328 168 SUPERFAMILY Pentein 1 162 - -
Seca9g05328 168 Pfam eIF-6 family 4 163 IPR002769 GO:0042256|GO:0043022
Seca9g05328 168 NCBIfam translation initiation factor IF-6 4 162 IPR002769 GO:0042256|GO:0043022
Seca9g05328 168 FunFam Eukaryotic translation initiation factor 6 1 166 - -
Seca9g05328 168 SMART eIF6neu2 3 165 IPR002769 GO:0042256|GO:0043022
Seca9g05328 168 Hamap Translation initiation factor 6 [eif6]. 1 168 IPR002769 GO:0042256|GO:0043022
Seca9g05328 168 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 162 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05328 Seca-Chr9 158828894 158833119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05328 1 161 Eukaryotic Initiation Factors Gene Family AT3G55620 90.683 1.78e-109 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05328 K03264 - ming:122066887 313.153