Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05321 ATGAATCATAATTGTGAGGATGATAGAGAAGTGGATGTTTATAAAATTGATGAAGTTGTAGATTTTGGTAAAGTGGATTTTTTTAGCTTAAATGGAGATGTCATTAAGCTTTACCACTTTGGTAATCGTGATATAGCATTTGGTTTTTACAATATGTATGCTGAAAAGATGGGGTTTGCTGCTCGTATATGGAATACTATGAAAAATAGAAAAGGTGAGATAACTCAGCATACCTTTGTGTGTTTCAAGCAAGGTTTTCGGCTAAAGAAACATATGAGGAAGGCTAACAGGAAGAGAGAAGCTAGAGCATTGACTAGGTGTGGTTGTCCAACATTTTTTCGTGTTCGATTTTGTAATGACACGGGTAGATGGCATGTTAAAGATTTTTCAGATGATCATAGCCATGGGATGTTATCAGAGAAGTTTGTCAGAATGTTGTGTGCACATAGGAAAATACATGAATATGATGTTATTCAATTGAATAGCATGATTGAGGCTGGTATTGGTGTGACTCAGATATATGGTTTAGCTGCAAATCAGTCTGGTGGGTATGACAGGTTGGGTTTCAGGAAAAGAGACATGTATAATGAGGTAGAGAAACAAAGGAGAATCTTAGTTAGTGATGTGAGAGCTGTCTTTGCCTACCTTAGAAAGTTGAAATCAACTGATCCAGAAATGTTTTGGAGACACACTGTTGATGAAGAAGATCGACTCCAACACTTATTTTGGGCGGATGGGAGAAGTCAAGTTGATTTTGTTCTTTTTGGTGATGTGGTTGCATTTGATGCGACTTATCGCCACAATAAGTATATGTCCCCATTGGTGGTATTTGCTGGTGTGAACCATCATAACCAAACAATTGTGTTTGGTAGTGGATTAATTGCAAATGAGACAGAAGAGACGTATGTTTGGCTCCTTAAACAATTTGTTGAAGCAATGAAGGGCAAGGTTCCAACTTATGTTATAACCGATGGGGATCTTGCAATGAGGAATACAATCCGATCTGTGTTTCCAGGTGCCCATCATAGACTTTGTGCATGA 1041 0.3785 MNHNCEDDREVDVYKIDEVVDFGKVDFFSLNGDVIKLYHFGNRDIAFGFYNMYAEKMGFAARIWNTMKNRKGEITQHTFVCFKQGFRLKKHMRKANRKREARALTRCGCPTFFRVRFCNDTGRWHVKDFSDDHSHGMLSEKFVRMLCAHRKIHEYDVIQLNSMIEAGIGVTQIYGLAANQSGGYDRLGFRKRDMYNEVEKQRRILVSDVRAVFAYLRKLKSTDPEMFWRHTVDEEDRLQHLFWADGRSQVDFVLFGDVVAFDATYRHNKYMSPLVVFAGVNHHNQTIVFGSGLIANETEETYVWLLKQFVEAMKGKVPTYVITDGDLAMRNTIRSVFPGAHHRLCA. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05321 346 Pfam FAR1 DNA-binding domain 49 137 IPR004330 -
Seca9g05321 346 PANTHER OS01G0519700 PROTEIN 45 345 - -
Seca9g05321 346 Pfam MULE transposase domain 258 345 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05321 Seca-Chr9 158735161 158736201 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05321 FAR1 5e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05321 - - mtr:112417123 369.777