Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05294 ATGGCTTCCTTAACCTTTCTTATCCTTACACTTGTCTTTCTTCATGTTTTCTTAGCTTTTGCAAACGTTAACCTCAGTTCAACACTCTCCACTAATGACAACCATGCATGGCTTTCACCTTCAGGTGAATTTGCTTTTGGATTTCGCCAACTTAGTGGAACAAGTCACTTCACTGTTGCCATCTGGTATGACAAAATACCAGACAAGACCATTGTTTGGAATGCCAAAGCAAATGATAACATTGCAGAAGCACCAACTGGATCACAGGTTCACCTCACATCAGAAGGGCTAATACTGACAAGTCCTGAAAAGGTGACTATATGGATGGCACGACCAGGTGGTGTTGTTTCCTTTGGAGCTATGCTTGACACTGGGAACTTTGTTCTTGCAAATAGGGAATCTACTTTTGTGTGGGAAAGTTTCAAGAATCCCACTGACACATTGCTCCCTAACCAATCTCTAAGTTTAGATGGCAAGCTAACTTCTAGAATCACAGAGACCAATTACACAAGAGGAAGGTTCCAACTTTATTTTCAAGATGGTAGTGTCTTCCTTTGTTCCCTTGGTTGGCCTTCTCAATTTCGTTATGACCCTTATTATGCATTTGATGCCTCTGGCTCTAGTTCAAAATTAGTGTTCAATAATTCAGGGGATATTTACATAGAGAGAACGGATGGTACTAGAGTCCAACCTCATGGTGCAAAATGGGATACTAATGTAATTCTTGATCCTATGGAGTATTACTATAGAGCAACACTAGACTTCCATGGAGTTTTCACACAGTATTCTCATCCAAGGGGCTCCACTTCCCAACCAGGTTGGGAAATTGTGAGGTATGTTCCTAACGACATATGTGCTGCAATAAACAGAACACTTGGTAGTGGTCCTTGTTGGTATAATAGCTACTGCTCCATGAAAAGTGACAGGCCAACATGTGAATGCCCATATGGGTATTCACTAGTAGATCCAAGTAACGAATTTGGTGGGTGCCAACCCAAATTTACCCTTGGTTGTGGAGCTGATACTGAAGGATTGCAAGGAAGGCCAGAAGAACTATATGAATTGCATGAATCAAGTGATAGGGACTTTATGTTTGCAGAATATGACATAATACAACCTTACTCTCTAAGTGAATGTAAACAATCTTGCTTGCAAGATTGCATGTGTGCTGCTGCTTCCTTCTCTAACAATGGTTGTTACAAGAAAAGATTACCCCTTATTAATGGAAAAATAGGTCCACTTACATATTTGATCTTTACTAAAACAAGAGATCATCCTCTGACTAGTTCAAACAAGGGACTCCCTACTCTTCCTGACTCAAGGGAAGAAGATCAAGCTAAACCAATTCTTTTGGGGACACTTATTGGCTCCCTTGTCGTTAATAGTATACTACTGGTTACTGTTGTTTTGGTGCTTCTCTTCAAGCCAAAAAGGATTGTCCAAGTTGCAAGTCTTTTGGAAACAAAATTGCATTCATTCACTTATGAAGTACTGAAAAGTGCCACACAGGATTTTAGTGAAGAACTAGGGAGGGGTTCCTTTGGCATTGTTTACAAAGGTACTCTAGACTCAGTTTTGTCTCATAATGTGGTTGCTGTCAAGAGATTGGACAGGTTAGGACCAGAAGGAGATAAGGAATTTAAGACTGAGTTGACTGCTATTGGCAAAACCTATCACAAAAATCTGGTACAGTTGATTGGATTTTGTGATGAGGGAATTCACAGACTATTAGTCTATGAGTTCATGAACAATGGTACTTTAGCAGACATCTTATTTGGACATCCCAAACCCATTTGGAATCTAAGGTTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTACATGAAGAGTGTGACACTCCCATCATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGACCATTTCACTGCAAAGATCTCTGACTTTGGGTTGGCCAAGCTGTTGTTGTCTCACCAAAGTAGAACCAACACCATGATACGAGGAACTAAAGGGTATGTGGCTCCTGAATGGTTCAAGAATGTGCCTGTGACAGTTAAAGTGGATGTTTATAGCTTTGGTGTCATGTTACTGGAAATCATTTGCTGCAGAAGAAATGTGCTGCTGAAGGACTCTGGGGAGGAAGAGAAGGCAATATTGACAGATTGGGCTTATGATTGCTATATGGAAGGGAGAATAGATGCTCTTCTGGATGATGATGACAAGGGGGCTATGGATGACTATGACAAGTTACAAAGGTGGGTAAAGATAGCAATTTGGTGCATCCAAGAGCATCATGAGATAAGGCCAACAATGGGAATGGTCATGCAAATGCTAGAAGGCTCTGTTGAGGTCCCTAATCCACCACCTCCTTATTCCTTCAGTTAG 2379 0.4073 MASLTFLILTLVFLHVFLAFANVNLSSTLSTNDNHAWLSPSGEFAFGFRQLSGTSHFTVAIWYDKIPDKTIVWNAKANDNIAEAPTGSQVHLTSEGLILTSPEKVTIWMARPGGVVSFGAMLDTGNFVLANRESTFVWESFKNPTDTLLPNQSLSLDGKLTSRITETNYTRGRFQLYFQDGSVFLCSLGWPSQFRYDPYYAFDASGSSSKLVFNNSGDIYIERTDGTRVQPHGAKWDTNVILDPMEYYYRATLDFHGVFTQYSHPRGSTSQPGWEIVRYVPNDICAAINRTLGSGPCWYNSYCSMKSDRPTCECPYGYSLVDPSNEFGGCQPKFTLGCGADTEGLQGRPEELYELHESSDRDFMFAEYDIIQPYSLSECKQSCLQDCMCAAASFSNNGCYKKRLPLINGKIGPLTYLIFTKTRDHPLTSSNKGLPTLPDSREEDQAKPILLGTLIGSLVVNSILLVTVVLVLLFKPKRIVQVASLLETKLHSFTYEVLKSATQDFSEELGRGSFGIVYKGTLDSVLSHNVVAVKRLDRLGPEGDKEFKTELTAIGKTYHKNLVQLIGFCDEGIHRLLVYEFMNNGTLADILFGHPKPIWNLRFGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDDHFTAKISDFGLAKLLLSHQSRTNTMIRGTKGYVAPEWFKNVPVTVKVDVYSFGVMLLEIICCRRNVLLKDSGEEEKAILTDWAYDCYMEGRIDALLDDDDKGAMDDYDKLQRWVKIAIWCIQEHHEIRPTMGMVMQMLEGSVEVPNPPPPYSFS. 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05294 792 Pfam Protein kinase domain 506 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05294 792 ProSitePatterns Protein kinases ATP-binding region signature. 509 534 IPR017441 GO:0005524
Seca9g05294 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 784 - -
Seca9g05294 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 185 IPR036426 -
Seca9g05294 792 Gene3D Phosphorylase Kinase; domain 1 471 581 - -
Seca9g05294 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 28 788 - -
Seca9g05294 792 FunFam S-receptor-like serine/threonine-protein kinase 475 581 - -
Seca9g05294 792 SMART serkin_6 503 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05294 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Seca9g05294 792 Pfam D-mannose binding lectin 70 159 IPR001480 -
Seca9g05294 792 Gene3D - 17 142 IPR036426 -
Seca9g05294 792 SUPERFAMILY Protein kinase-like (PK-like) 486 777 IPR011009 -
Seca9g05294 792 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05294 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 19 142 - -
Seca9g05294 792 SMART blect_4 28 144 IPR001480 -
Seca9g05294 792 PIRSF SRK 1 792 IPR024171 GO:0004674
Seca9g05294 792 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Seca9g05294 792 Gene3D - 143 271 IPR036426 -
Seca9g05294 792 Gene3D Transferase(Phosphotransferase) domain 1 582 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05294 Seca-Chr9 158088632 158091010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05294 407 782 Receptor kinase-like Gene Family AT1G56120 39.535 2.47e-69 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Seca9g05294 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05294 - - gmx:100775269 1057.36