Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g05294 | ATGGCTTCCTTAACCTTTCTTATCCTTACACTTGTCTTTCTTCATGTTTTCTTAGCTTTTGCAAACGTTAACCTCAGTTCAACACTCTCCACTAATGACAACCATGCATGGCTTTCACCTTCAGGTGAATTTGCTTTTGGATTTCGCCAACTTAGTGGAACAAGTCACTTCACTGTTGCCATCTGGTATGACAAAATACCAGACAAGACCATTGTTTGGAATGCCAAAGCAAATGATAACATTGCAGAAGCACCAACTGGATCACAGGTTCACCTCACATCAGAAGGGCTAATACTGACAAGTCCTGAAAAGGTGACTATATGGATGGCACGACCAGGTGGTGTTGTTTCCTTTGGAGCTATGCTTGACACTGGGAACTTTGTTCTTGCAAATAGGGAATCTACTTTTGTGTGGGAAAGTTTCAAGAATCCCACTGACACATTGCTCCCTAACCAATCTCTAAGTTTAGATGGCAAGCTAACTTCTAGAATCACAGAGACCAATTACACAAGAGGAAGGTTCCAACTTTATTTTCAAGATGGTAGTGTCTTCCTTTGTTCCCTTGGTTGGCCTTCTCAATTTCGTTATGACCCTTATTATGCATTTGATGCCTCTGGCTCTAGTTCAAAATTAGTGTTCAATAATTCAGGGGATATTTACATAGAGAGAACGGATGGTACTAGAGTCCAACCTCATGGTGCAAAATGGGATACTAATGTAATTCTTGATCCTATGGAGTATTACTATAGAGCAACACTAGACTTCCATGGAGTTTTCACACAGTATTCTCATCCAAGGGGCTCCACTTCCCAACCAGGTTGGGAAATTGTGAGGTATGTTCCTAACGACATATGTGCTGCAATAAACAGAACACTTGGTAGTGGTCCTTGTTGGTATAATAGCTACTGCTCCATGAAAAGTGACAGGCCAACATGTGAATGCCCATATGGGTATTCACTAGTAGATCCAAGTAACGAATTTGGTGGGTGCCAACCCAAATTTACCCTTGGTTGTGGAGCTGATACTGAAGGATTGCAAGGAAGGCCAGAAGAACTATATGAATTGCATGAATCAAGTGATAGGGACTTTATGTTTGCAGAATATGACATAATACAACCTTACTCTCTAAGTGAATGTAAACAATCTTGCTTGCAAGATTGCATGTGTGCTGCTGCTTCCTTCTCTAACAATGGTTGTTACAAGAAAAGATTACCCCTTATTAATGGAAAAATAGGTCCACTTACATATTTGATCTTTACTAAAACAAGAGATCATCCTCTGACTAGTTCAAACAAGGGACTCCCTACTCTTCCTGACTCAAGGGAAGAAGATCAAGCTAAACCAATTCTTTTGGGGACACTTATTGGCTCCCTTGTCGTTAATAGTATACTACTGGTTACTGTTGTTTTGGTGCTTCTCTTCAAGCCAAAAAGGATTGTCCAAGTTGCAAGTCTTTTGGAAACAAAATTGCATTCATTCACTTATGAAGTACTGAAAAGTGCCACACAGGATTTTAGTGAAGAACTAGGGAGGGGTTCCTTTGGCATTGTTTACAAAGGTACTCTAGACTCAGTTTTGTCTCATAATGTGGTTGCTGTCAAGAGATTGGACAGGTTAGGACCAGAAGGAGATAAGGAATTTAAGACTGAGTTGACTGCTATTGGCAAAACCTATCACAAAAATCTGGTACAGTTGATTGGATTTTGTGATGAGGGAATTCACAGACTATTAGTCTATGAGTTCATGAACAATGGTACTTTAGCAGACATCTTATTTGGACATCCCAAACCCATTTGGAATCTAAGGTTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTACATGAAGAGTGTGACACTCCCATCATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGACCATTTCACTGCAAAGATCTCTGACTTTGGGTTGGCCAAGCTGTTGTTGTCTCACCAAAGTAGAACCAACACCATGATACGAGGAACTAAAGGGTATGTGGCTCCTGAATGGTTCAAGAATGTGCCTGTGACAGTTAAAGTGGATGTTTATAGCTTTGGTGTCATGTTACTGGAAATCATTTGCTGCAGAAGAAATGTGCTGCTGAAGGACTCTGGGGAGGAAGAGAAGGCAATATTGACAGATTGGGCTTATGATTGCTATATGGAAGGGAGAATAGATGCTCTTCTGGATGATGATGACAAGGGGGCTATGGATGACTATGACAAGTTACAAAGGTGGGTAAAGATAGCAATTTGGTGCATCCAAGAGCATCATGAGATAAGGCCAACAATGGGAATGGTCATGCAAATGCTAGAAGGCTCTGTTGAGGTCCCTAATCCACCACCTCCTTATTCCTTCAGTTAG | 2379 | 0.4073 | MASLTFLILTLVFLHVFLAFANVNLSSTLSTNDNHAWLSPSGEFAFGFRQLSGTSHFTVAIWYDKIPDKTIVWNAKANDNIAEAPTGSQVHLTSEGLILTSPEKVTIWMARPGGVVSFGAMLDTGNFVLANRESTFVWESFKNPTDTLLPNQSLSLDGKLTSRITETNYTRGRFQLYFQDGSVFLCSLGWPSQFRYDPYYAFDASGSSSKLVFNNSGDIYIERTDGTRVQPHGAKWDTNVILDPMEYYYRATLDFHGVFTQYSHPRGSTSQPGWEIVRYVPNDICAAINRTLGSGPCWYNSYCSMKSDRPTCECPYGYSLVDPSNEFGGCQPKFTLGCGADTEGLQGRPEELYELHESSDRDFMFAEYDIIQPYSLSECKQSCLQDCMCAAASFSNNGCYKKRLPLINGKIGPLTYLIFTKTRDHPLTSSNKGLPTLPDSREEDQAKPILLGTLIGSLVVNSILLVTVVLVLLFKPKRIVQVASLLETKLHSFTYEVLKSATQDFSEELGRGSFGIVYKGTLDSVLSHNVVAVKRLDRLGPEGDKEFKTELTAIGKTYHKNLVQLIGFCDEGIHRLLVYEFMNNGTLADILFGHPKPIWNLRFGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDDHFTAKISDFGLAKLLLSHQSRTNTMIRGTKGYVAPEWFKNVPVTVKVDVYSFGVMLLEIICCRRNVLLKDSGEEEKAILTDWAYDCYMEGRIDALLDDDDKGAMDDYDKLQRWVKIAIWCIQEHHEIRPTMGMVMQMLEGSVEVPNPPPPYSFS. | 793 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g05294 | 792 | Pfam | Protein kinase domain | 506 | 774 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g05294 | 792 | ProSitePatterns | Protein kinases ATP-binding region signature. | 509 | 534 | IPR017441 | GO:0005524 | |
Seca9g05294 | 792 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 582 | 784 | - | - | |
Seca9g05294 | 792 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 57 | 185 | IPR036426 | - | |
Seca9g05294 | 792 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 581 | - | - | |
Seca9g05294 | 792 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 28 | 788 | - | - | |
Seca9g05294 | 792 | FunFam | S-receptor-like serine/threonine-protein kinase | 475 | 581 | - | - | |
Seca9g05294 | 792 | SMART | serkin_6 | 503 | 752 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g05294 | 792 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 624 | 636 | IPR008271 | GO:0004672|GO:0006468 | |
Seca9g05294 | 792 | Pfam | D-mannose binding lectin | 70 | 159 | IPR001480 | - | |
Seca9g05294 | 792 | Gene3D | - | 17 | 142 | IPR036426 | - | |
Seca9g05294 | 792 | SUPERFAMILY | Protein kinase-like (PK-like) | 486 | 777 | IPR011009 | - | |
Seca9g05294 | 792 | ProSiteProfiles | Protein kinase domain profile. | 503 | 780 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g05294 | 792 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 | 19 | 142 | - | - | |
Seca9g05294 | 792 | SMART | blect_4 | 28 | 144 | IPR001480 | - | |
Seca9g05294 | 792 | PIRSF | SRK | 1 | 792 | IPR024171 | GO:0004674 | |
Seca9g05294 | 792 | ProSiteProfiles | Bulb-type lectin domain profile. | 22 | 142 | IPR001480 | - | |
Seca9g05294 | 792 | Gene3D | - | 143 | 271 | IPR036426 | - | |
Seca9g05294 | 792 | Gene3D | Transferase(Phosphotransferase) domain 1 | 582 | 786 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g05294 | Seca-Chr9 | 158088632 | 158091010 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g05294 | 407 | 782 | Receptor kinase-like Gene Family | AT1G56120 | 39.535 | 2.47e-69 | 243 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Seca9g05294 | Pkinase | 1.8e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g05294 | - | - | gmx:100775269 | 1057.36 |