Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05291 ATGGCTAATTTGCTTACAGTATTTTTCATCATGGAGGTGATAGTGAGTGGTTTAAGATTTGGAGTCGATGGTTTGAACATGAACTACTACTTGTTGAGCTGCCCTTTTGTTGACTCTGTTGTTAAGAGCAAAGTCAACAGTGCTCTGCAGAATGATCCCACTCTAGCAGCAGGTCTAGTTAGAATGCATTTCCATGACTGTTTCATAGAGGGATGTGATGGGTCAGTTCTGATTGACTCCACTAAGGATAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGAGGTTATGAGGTCATAGATGACATCAAAGAAGAGCTTGAAAAAAGATGCCCTGGAGTGGTTTCATGCTCTGATATTCTTGCTATGGCTGCAAGAGATGCAGTTTTCTTTGCTGGGGGTCCAGTGTATGACATACCAAAAGGAAGGAAGGATGGAACAAGGTCCAAAATTGAGGACACTTTCAATCTGCCACCCCCAATCTTCAATGCTTCTCAGCTGATCAGGATGTTTGGACAGCATGGGCTTTCTGCAAGAGATATGGTGGCTCTCTCTGGTAATATGATATCCTATAGAGCTCACACATTAGGGGTGGCAAGGTGTGCTTCTTTCAAGAACAGACTGACCCAAGGGGATCCAACTTTGGACTCAGAATTTGCAAAGACACTCTCCAAAACATGCAACGCAGGCGACAATGCAGAGCAGCCCTTTGATGCCACAAGGAACGATTTTGATAACTTATACTTCAATTCATTGGTCACAAACAATGGGGTTCTTACATCAGACCAAACATTGTACACTAGCCCACAAACGAGGAACATTGTGAGCATTTATGCAAGGAACCAGGCCTTGTTTTTCTTGGATTTCCAACAGGCAATGGTGAAGATGAGCATGCTCGATGTCAAAGAAGGTTCCAAAGGGGAAGTTCGAAAAAATTGCCATAAAATAAACTGA 960 0.4281 MANLLTVFFIMEVIVSGLRFGVDGLNMNYYLLSCPFVDSVVKSKVNSALQNDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEELEKRCPGVVSCSDILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTFNLPPPIFNASQLIRMFGQHGLSARDMVALSGNMISYRAHTLGVARCASFKNRLTQGDPTLDSEFAKTLSKTCNAGDNAEQPFDATRNDFDNLYFNSLVTNNGVLTSDQTLYTSPQTRNIVSIYARNQALFFLDFQQAMVKMSMLDVKEGSKGEVRKNCHKIN. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05291 319 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Seca9g05291 319 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 FunFam Peroxidase 28 163 - -
Seca9g05291 319 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Seca9g05291 319 Gene3D - 28 319 - -
Seca9g05291 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 FunFam Peroxidase 160 298 - -
Seca9g05291 319 SUPERFAMILY Heme-dependent peroxidases 24 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PANTHER PEROXIDASE 25-RELATED 10 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 Gene3D Peroxidase, domain 2 160 298 - -
Seca9g05291 319 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca9g05291 319 ProSiteProfiles Plant heme peroxidase family profile. 24 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05291 Seca-Chr9 158001074 158003588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05291 2 319 Peroxidase AT4G33420 70.440 8.85e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05291 K00430 - gmx:100809245 552.362