Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05272 ATGTGCTTTTTGATGGATCCTCAAACTGGGAAGAAGGTCTGCTATGTCCAGTTTCCTCAGAGAGTTTATGGTATTGATACTCATGATCATTATGCCAACAGGAACACAGTTTTCTTTGATATTAACATAAAGGGTCTAGATGGTATTCAGGATCCTGTATATGTGGGGACAGGATGTGTTTTAGGAGGCAAGATTTGGATGGATGATGACAAAGAGCTGCTAATGTCCCAAATGAATTTTGAGAAGAAATTTGGGCAGTCATCTGTTTTTGTGACTTCTACCTTGATGGAAGAGGGTGGTGTACCTCCTTCCTCAAGTCCAGAAGCCCTGCTTAAAGAAGCCATTCATGTAATTAGCTGTGGATATGAAGATAAAACTGAATGGGGACTTGAGGATGGAAAACTTGGTGCGCTATTTGGTACTTTGACACAATTCTCAAAGCTCAAATATTTGCATATGTAA 462 0.3983 MCFLMDPQTGKKVCYVQFPQRVYGIDTHDHYANRNTVFFDINIKGLDGIQDPVYVGTGCVLGGKIWMDDDKELLMSQMNFEKKFGQSSVFVTSTLMEEGGVPPSSSPEALLKEAIHVISCGYEDKTEWGLEDGKLGALFGTLTQFSKLKYLHM. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05272 153 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 133 - -
Seca9g05272 153 Pfam Cellulose synthase 67 143 IPR005150 GO:0016020|GO:0016760|GO:0030244
Seca9g05272 153 Pfam Cellulose synthase 1 61 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05272 Seca-Chr9 157515208 157517182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05272 1 144 Cell Wall Biosynthesis AT5G17420 59.585 1.17e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05272 K10999 - gmx:100815436 229.565