Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05262 ATGAATCCTGCCCCAAGTTTCTCTGCTTCACCGTCTTGTCAAAATATGAATGTAGCTTCAATTCAAATTGCTGAAGGTGTAGAGAAATGGGTCGATAATATTCACAACAATGTTGTGCAACATGGCCAAGAGTATGTTACTGACTATATACCACACTTGGCAATGGAGTTTGAATTCGAGGTAGCTGCCTATGAATTTTACAATGAGTACAGTAAGAGGGTTGGGTTTGGAATTCGTCGAGAATATGAAAATAAAAGCAAAAAAGATGGAATTTTGACTTCAAGAAGATTCTCATGCTTCAAAGAGGGCAAACGATGTGTTGACAAACGAGACCACTTGACGAAAGAGCCTAGAGCAGAAACCAGAACAGGATGTGAAGCCCGTATGGTTATTTCACTTGATCGGAAGATAGGGAAATACAAGGTTATTGACTTTATAGCTCAACATAATCACCCTCTTCAATCGACAAAATATGCTTATATGATTCGTTCTCATCGAAAAATTTCTGAGTCACAAGCATCACACATTGTATTGGCAGATGCACCTGGATTGAAACCAAAAGATTTTCATAATATGTGTCCAAGCAATCTGGTGGAATAG 600 0.385 MNPAPSFSASPSCQNMNVASIQIAEGVEKWVDNIHNNVVQHGQEYVTDYIPHLAMEFEFEVAAYEFYNEYSKRVGFGIRREYENKSKKDGILTSRRFSCFKEGKRCVDKRDHLTKEPRAETRTGCEARMVISLDRKIGKYKVIDFIAQHNHPLQSTKYAYMIRSHRKISESQASHIVLADAPGLKPKDFHNMCPSNLVE. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05262 199 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 35 186 - -
Seca9g05262 199 Pfam FAR1 DNA-binding domain 65 154 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05262 Seca-Chr9 157283159 157284084 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05262 FAR1 8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05262 - - psat:127085847 234.572