Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05245 ATGGAGTGCAATAAGGATGAGGCTACCAGGGCTAAAGAAATTGCTGAGAGGAAGTTTATTGCAAAGGATACTTTGGGTGCAAAGAAGTTTGCTTTGAAAGCCCAAAATTTATTTCCTGCCCTTGAGGGTATTCCTCAAATGATATCAACCCTTGATGTGTATATTTCTGCTGAGAATAAAATAAAGGGAGAAGCAGATTGGTATGGTATACTTGGTGTGGACCCCCTCGCCGATGATGATACAGTGAGGAAACAATACAGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTTATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCAGCTTATGATGAGAAGAGAAATGGAAAAGCACGGAAAGGTTCAACTCTATTTGGAGGTTCAGCAAAAACAGGGGCTAATGGCAGTTACAATTTTACTAAGACTGCCCCTTCAAGTGCAAGGACTCCAAAGAACACTACTGCTAAGGAAAACACTTCATCTTCTACACATAAGTCAAAACCTACATTTTGGACTGCTTGCCATAATTGCAAAATGCAGTATGAGTATCTCAGGGTTTATCTTAACCTTAAACTTTTGTGTCCCAACTGCCATCAGGCATTTTTCGCTGTAGAAACTGATCCACCTCCTGCAAGTGGTATTCGACCTGCAACATCGTGGACCTTTTCACAGAATCAGCAAAAGTTCAGTCGCCAAGTACCTAATAAAAGCAAATCTAATGCTGGAAAGAACAATATGGCAGCTCCAAATGTTAAAGCAGGGTCTTATAGTAAAACTGAATCCTATAACAAAACCAATTTCCAGTGGGCTCCATTCTCAAAAACTTCTGGTGTTTCTAATGTGGCTCAAGCTGCAAGTGTGGTTCAGCAGGCATATGATAAGGTGAAGCGAGATCGCGAGGAGGCACAAGCAGCTACCAAAAGGGAAGAAGCCTTAAAAAGGAAGCAGCATGTCTCTAAAAAAGGTTACCTTAATCCTACCAAGAGAAGAAAGGGGGGCATGGAGGATGCAAGTATGGGTAACTGTGGCAAGGAACCTGTTAATCGAATGGGTGTGGGTAATGGAGCAGGAGAGAAAGCTAAAAAGGGTAATTTTGAATATAATAGCATAAATGGAATTAATAAGATCTGTAGTGAAAGAGGCGTCTCCCCAATAGAACTTCAGAATCTTCTTATGGAGAAAGCTAGAAAAGAAATTAGTAAGAAACTCTGCAAAATTCAGTTGAATACCGTTGAAAAATCAGTGGTTAGAGAGAGTGGAAATGGCTTCCAGAAAGCAAATGAGAAAGAACAAAAGTCCTTAAAAAACTCTGAAACGTGTGCTCAGAATAACATTGGAAAGTCAGAAGATAGCAAGAGCGGATTGCCAGCCATCGAGTCATTTGGAGGTACTTCCATTGATAGAATTAGCTCAAAATTTTTTAACACAATGCCTGTAGATGTTCCAGATCCTGATTTCCATGATTTTTACAAGGATCGAACTGAAAGATCATTTTGTGAGAATCAAGTATGGGCTGCATATGATGATGATGGGATGCCTCGATATTATGCAATGATCCACAAGGTGATCTCTCTGAATCCATTCAAGATGCAGATCAGTTGGCTCAACCCAAATACCAACAGTGAACTGGGCTCCCTAAATTGGGTTGCTGTAGGCTTTTCAAAAACTTGTGGGGATTTCAGAATAGGCAGACATGAAGTCTGTAACTCGATCAATTATTTTTCTCACAAGGTTAGGTGGAGAGAAAGTAATGATGGAGCCATTTGTATATATCCCAGAAAAGGGGATGTTTGGGCCATCTATAGGAATTGGTCTCCTGACTGGAATGAGCTAACAGCAGATGAGGTTATACACGAGTTTGATGTGGTTGAAGTACTTGAGGATTTTATTGAAGAACGTGGTGTAACTGTTATTCCTCTGGTCAAGGTGGCTGCATTCAAGACAATATTTCACCACCACTTAGATCCGAGAGAAATCAGGATCATTCCAAGCGAAGAGATGCTCCGGTTCTCTCATCGGATACCTTCATACTCGCTTACTGGTAGAGAAGCTCCAAATGCTCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCTACTCCATTTGAACTTCTTCAGGTATTAGAAGTTGTGGAGGAAGACATGGTGGATGGTGGGGATAGCGATATAACAGAAAAAAGTGATAAAATGAAAGAAGCTAAATGTGAGGAAATAAGTGATATGGGAAAACTTGGGGAAGAAAAGGAGGGAAGGAATAAAGATAACCAGGAAATAGAAACTTTGAAAGAGGACAGAGGGAAGAAGATATGTGAAGGCTTGTAG 2367 0.4115 MECNKDEATRAKEIAERKFIAKDTLGAKKFALKAQNLFPALEGIPQMISTLDVYISAENKIKGEADWYGILGVDPLADDDTVRKQYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKAKRAAYDEKRNGKARKGSTLFGGSAKTGANGSYNFTKTAPSSARTPKNTTAKENTSSSTHKSKPTFWTACHNCKMQYEYLRVYLNLKLLCPNCHQAFFAVETDPPPASGIRPATSWTFSQNQQKFSRQVPNKSKSNAGKNNMAAPNVKAGSYSKTESYNKTNFQWAPFSKTSGVSNVAQAASVVQQAYDKVKRDREEAQAATKREEALKRKQHVSKKGYLNPTKRRKGGMEDASMGNCGKEPVNRMGVGNGAGEKAKKGNFEYNSINGINKICSERGVSPIELQNLLMEKARKEISKKLCKIQLNTVEKSVVRESGNGFQKANEKEQKSLKNSETCAQNNIGKSEDSKSGLPAIESFGGTSIDRISSKFFNTMPVDVPDPDFHDFYKDRTERSFCENQVWAAYDDDGMPRYYAMIHKVISLNPFKMQISWLNPNTNSELGSLNWVAVGFSKTCGDFRIGRHEVCNSINYFSHKVRWRESNDGAICIYPRKGDVWAIYRNWSPDWNELTADEVIHEFDVVEVLEDFIEERGVTVIPLVKVAAFKTIFHHHLDPREIRIIPSEEMLRFSHRIPSYSLTGREAPNAPKGCRVLDPAATPFELLQVLEVVEEDMVDGGDSDITEKSDKMKEAKCEEISDMGKLGEEKEGRNKDNQEIETLKEDRGKKICEGL. 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05245 788 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Seca9g05245 788 SMART dnaj_3 65 122 IPR001623 -
Seca9g05245 788 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Seca9g05245 788 Pfam Domain of unknown function (DUF3444) 494 699 IPR024593 -
Seca9g05245 788 MobiDBLite consensus disorder prediction 340 366 - -
Seca9g05245 788 PRINTS DnaJ domain signature 86 101 IPR001623 -
Seca9g05245 788 PRINTS DnaJ domain signature 122 141 IPR001623 -
Seca9g05245 788 PRINTS DnaJ domain signature 68 86 IPR001623 -
Seca9g05245 788 PRINTS DnaJ domain signature 102 122 IPR001623 -
Seca9g05245 788 MobiDBLite consensus disorder prediction 452 466 - -
Seca9g05245 788 Pfam DnaJ domain 66 127 IPR001623 -
Seca9g05245 788 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Seca9g05245 788 Gene3D DnaJ domain 63 181 IPR036869 -
Seca9g05245 788 MobiDBLite consensus disorder prediction 438 469 - -
Seca9g05245 788 CDD DnaJ 66 119 IPR001623 -
Seca9g05245 788 MobiDBLite consensus disorder prediction 157 182 - -
Seca9g05245 788 PANTHER BNAC03G44070D PROTEIN 1 716 - -
Seca9g05245 788 Coils Coil 304 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05245 Seca-Chr9 157097964 157103241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05245 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.752 9.47e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05245 - - lja:Lj2g3v0520120.1 1116.29