Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05238 ATGAAAACCGCGATGCAATTGCAGTTCCGCTATAAGCGCTATAGCGGCCGCTATATCGGTTGCGGTGATAGAGCTCGAGCTTCTAAAGTCGAGAATCAGGATGCAATAGATTCTTCATTAGTTGGGATGTTGGATGATCCAAAAGAGGCCATGGTTGCTCGTGGGGACCTTGGAGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGAGCCATATGGGAGGAATGTTTGCTTTCCATGCGACAGTTATGTCTAACACTCTTAATACTCCTATTATTGTTTTCACCAAAACAGGATCCATGGCTATTCTTTTGAGCCATTACAGGCCCTACTCAACTATCTTTCCATTCACAAACGAGTGA 363 0.4408 MKTAMQLQFRYKRYSGRYIGCGDRARASKVENQDAIDSSLVGMLDDPKEAMVARGDLGAELPIEEVPLLQSHMGGMFAFHATVMSNTLNTPIIVFTKTGSMAILLSHYRPYSTIFPFTNE. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05238 120 Gene3D - 28 72 IPR040442 -
Seca9g05238 120 SUPERFAMILY PK C-terminal domain-like 69 119 IPR036918 -
Seca9g05238 120 PANTHER PYRUVATE KINASE 28 73 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Seca9g05238 120 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 22 88 IPR015813 GO:0003824
Seca9g05238 120 Gene3D - 73 120 IPR036918 -
Seca9g05238 120 Pfam Pyruvate kinase, barrel domain 28 74 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05238 Seca-Chr9 157023025 157026041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05238 25 50 Primary Pumps ATPases AT3G42640 80.769 2.34e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05238 K00873 - aew:130767638 98.2117