Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05211 ATGGCTTCCCTTGCTGCTTCCACAGCAGCTGCTTCCCTTGGCATGTCAGAAATGCTTGGAAATCCCATCAACTTGAGTGGTGCCACAAGGTCAGCCCCATCTCCCTCAACCCCTGCTACCTTCAAAACTGTGGCCCTTTTCTCCAAAAAGAAGGCACCACCACCACCTCCTCCAAAGCAGAAAGCTGCTGCTGTTTCTTCTGCCAATGATGAGCTCGCCAAGTGGTATGGTCCTGATAGAAGGATCTTCTTGCCAGATGGTCTTTTGGACCGATCTGAGATCCCAGAGTACTTGACTGGTGAAGTTCCTGGAGACTATGGTTATGACCCATTTCGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATATGAGTTGATTCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATTATTCCTGAGGCCTTCAACAAATTTGGAGCCAACTGTGGTCCTGAGGCTGTTTGGTTCAAGGTTTGCAAGCTCTATAAGAACTATCACTGTGAATTTAGTGTTTTATATGGGGCATTTTAG 546 0.4762 MASLAASTAAASLGMSEMLGNPINLSGATRSAPSPSTPATFKTVALFSKKKAPPPPPPKQKAAAVSSANDELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFRLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKVCKLYKNYHCEFSVLYGAF. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05211 181 SUPERFAMILY Chlorophyll a-b binding protein 75 163 - -
Seca9g05211 181 Gene3D Chlorophyll a/b binding protein domain 82 176 - -
Seca9g05211 181 Pfam Chlorophyll A-B binding protein 95 162 IPR022796 -
Seca9g05211 181 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 38 165 IPR001344 GO:0009765|GO:0016020
Seca9g05211 181 MobiDBLite consensus disorder prediction 45 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05211 Seca-Chr9 156382911 156384589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05211 11 166 Chloroplast and Mitochondria Gene Families AT4G10340 73.248 4.08e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05211 K08916 - cpap:110818730 286.189