Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05204 ATGGCTCTTTTACCATTATCTTCCTCTTCCTTCACCTATGGATTCACCCACCAAGTATTCCTTAGCTTTAGAGGCACTGATACTCGCTATGGTTTTACTGGCAATCTCTACAAAGCTCTCAGTGACAGAGGAATAGACACTTTCATTGATGACGAGGAGCTTCGAAAAGGGGAGGAAATCACACCATCACTTCTCAAGGCCATTGAAGAGTCCAGGATTGCAATCATTGTGCTCTCTAAGAACTATGCATCTTCATCATTTTGCTTGGATGAACTTTCCAAGATTCTTGATTGCATTAAGGAAAAGTGCCGACTGGTTTTGCCGGTATTTTACGATGTGGACCCTTCTGATATGCGAAAACTGACAGGGACTTTTGGAGAAGCAATGACTAAGCATGAGGAGAGGTTCAAGGATGACAAGGAGAAATTGCAAAAATGGAAGATGGCTCTGCAGAACGTGGCTAATTTGTCTGGTTGGCATTTCAAGCATGGGACTACATATGAACACGAGTTTGTCACAAAGATTGTTGAAGAGGTCTCAAAAAAGATTAAACGTGTGGCTTTACCTATTGCTGATTACCCAATTGGATTGGAATCTCCAATGTTGAATGTAATTAGGCTTCTGGATATCGGGTCTGATGATAGATGTCATATGGTGGGGATTTATGGAATTGGTGGTATAGGTAAAACAACCCTTGCTCTAGCAGTTTATAATTTGGTTGCTGACCATTTTGAAGCTATGTGTTTTCTTGAAAATGTTAGAGAAAATTCACAGAAAGATGGGTTAATGCATATCCAAAAGAGCATTCTTTCTGAATTAGTTGGAGAGAAGGAAATTAAGTTAACAAGTGTCAAACAAGGAATTTCAATAATACAACAAAGACTCCAGAAAAAGAAGGTTCTTTTGATTCTAGATGATATTGACAACCGGAAGCAATTAGAGGCTATTGCCGGAAGTGTTGAATGGTTTGGTCTTGGCAGTCGAGTCATTATCACAACGCGAGACAAACATTTACTAGCATGTCACCGGGTTGAAAGTACATATGAGGTGCAACAATTGAACAAGGAAAAAGCTCTTGAATTGCTAAAATGGAAAGCTTTTAAAAATAAACAAGTTAGTCCAAGTTTTATGGACATTTTGAACTATGCAGTGACTTATGCTTCTGGACTTCCGTTGGCCTTGGAAGTAATAGGTTCCCACTTGTTTGGAAAAAGCGTAGAAGAATGGAAATCAGCATTGGATCAATATAAAAGGATTCCTCATGATGAGATCCAAAATATTCTTAAAGTGAGTTTTGATGCTTTGGGGGAAGAAGAGAAAAGTGTTTTTCTCGACATAGCTTGTTCTTTCAAAGGATATAAATTGGTAGAGGTTGAGGAAATACTTTGTGCTCATTATGGTGGCTGCATGAAATATCACATTGGAGTGTTGGTTGAAAAGTCACTCATAAAGAGTTGGTTTGGTAGTGTGACAATGCATGACTTGATAGAGGATATGGGAAAAGAAATTGTCCGGCAAGAATCACCGAAACACCCTGGGAAACGTAGTAGGTTGTGGTCTCCAACAGATATAGTTAAAGTTTTAAAAGAAAATACGAAGTTCATGAATGTTACAATTTTAAGTTTTGACTGGTGTGAATGTTTAACAACAATACCAGATGTGTCTGATCTCCTAAATGTTGAACAATTTTCATTTAAACACTGTTGCACGAGCCTCGTGAGTTTTCCAGAAATACTAGCCGAGATGAAAAATATAACAGAGCTTAAATTGAATGACATTAACATAAAAGAATTTCCATTTTCATTTCGTAATATTAGTCAGCTTCAATTGTTAATGCTGAAAAAGATTGGAACTAATTTTCAATTACCAAGTAGCATTTGTATGATGTCAGAGCTGGTTGAGATTTGTATCTCCGATGGGAGGGCAGAGCCATTCATAAAAGAGGATGAGGGTGAAGAAAAAGTGAGCTCAATCATGTCTTCAAACTTACAACGTCTTCAACTCAGTTCGATGACAATTAATTTATGCAACAGCAACCTATTAGATGAATTTTTGGCAATATGTCTCCGGCGTTTTGCAAACATAAAAGAATTAGACCTATCATACAGTGGATTTACAATTATTCCTGAATGCATCAAAGAATGTCACTTTTTATGGAAACTTGACTTGAAAAGATGCCTACAACTTCAAGAAATTAGAGGGATTCCGCCAAACTTAAAATATTTATCAGCAGAGGAATGTGACTCCTTGAGTTCCTGGAGTAGAAGCATGTTACTGAATGAGGAAGTGCATGAGGCTGGAGACACCTTGTTTTATTTGCCAAGCCCAAAGCAGCGAAGGATTCCAGAGTGGTTCGAACACCAGAAAATGGGACTATCAACTTCTTTCTCTTTCTGTAACAAGTTCCCTCACATTGCTTTCTGTCTTGCTGCTCATTCTTGTTCAAACGCATACGAATGGAATGGGACTTTTAGTGTAGACGTGATCATCAACGGCAAGAAGTTTGAATGTTTCAAAGTATCTTCTAGCCATGGGCTGTGTCATACACATCTTGTTCATATGCTAACGGTGGATGAAGCACTCTTAGAAAATGAGCGGAGCCATGCAAACAATGAATTCCCATTCCTTATAAGAGGCGGCACATTCCTTATGAGACCAGTCCCTCTATCGAAAGAGGAATGCACTTCTATAAAGGGAAGAGTACTAATGGGAGAGTACGACCATAATCTGGATGAAGCAGTTTTCAAAAATGAGTGGAACCATGTGGAAATTAAGGTAACCATTAAACGACCAACCTTTATGCAAATTGGAATCCATGTATTGAAAGAGAAAAATAGCATGGAGGATATTCGTTTACCTGATAATAAGGATGACTTTGAAACTATCGACCAATTAGCAAATATCATTTTCGTGGTGCCAGCACTAGCTGATTTTTTTATCAAGAGAAAAGAGGTTGAAGAAAAATTAAGGTCAATGTTGTCTTCAAATTTTGAATGTCTTGACCTCTCAGGCTGCCACCTGTCAAATCAATGTTTCCCAATAGGTCTCATTGGATTCCCTAACTTAAAGGAATTGAACCTATCGAAGAATGACTTCACATATGTTCCTGAATGCTTCAAAGAATGGCACTTTTTAGAGAAGCTTCAATTGGATTATTGCGAAAATCTTGAAAATATTTATGGGATTCCACCAAGCTTAAGATACTTATCTATAAAAGGATGCAATTCCTTGTGGCTCTGGGATACAGACATGTTGATGTTACTGAAACAGGAACTGCATGAGGCTGGAAACACTTATTTTTGTTTGCCACGAATGTGGATCCTAGAGTGGATTGAGCATCGGGAAAAGGAACTGTATAAGGGTGGGAACTCTGATGTTTGGTTGCCAGGATCAGGGATTCCAGAGTGGTTCGAGCACCAGAGGATGGGATTGTCAACTTCTTTCTGGTTTCGTAACAAGTTCCCAAACATATCTCTTTGTCTTGCTCTTTATTGTCCACAAACATTGTGGTGTTTTCATGTAATTGTGATCATCAACGGCAAGGAATTTAAATATATGGAGGAATTTGGATTCAATAAGCTGGATAATACATATCTTTTTAATGTGCAAAAGGAAAAATTCAAGTTTGACAAAGCACTTTTAGAGCATGAGTGGAACCATGTGGAGATTAAGATACACTCTGATTCCCCAATTAAGGTAGAAAGCGGAATCCATATATTTAAAGAGAAAAGTAGCATGGAGGATATCTGTTTTACGGATCCTCATAGAAAATTAGACTTCAACTTACCACCACTTCCAGAGAATGATGAGAAATTAGACTTGAGCTTGGCTCCACTTCTAGAAAAATGA 3849 0.3809 MALLPLSSSSFTYGFTHQVFLSFRGTDTRYGFTGNLYKALSDRGIDTFIDDEELRKGEEITPSLLKAIEESRIAIIVLSKNYASSSFCLDELSKILDCIKEKCRLVLPVFYDVDPSDMRKLTGTFGEAMTKHEERFKDDKEKLQKWKMALQNVANLSGWHFKHGTTYEHEFVTKIVEEVSKKIKRVALPIADYPIGLESPMLNVIRLLDIGSDDRCHMVGIYGIGGIGKTTLALAVYNLVADHFEAMCFLENVRENSQKDGLMHIQKSILSELVGEKEIKLTSVKQGISIIQQRLQKKKVLLILDDIDNRKQLEAIAGSVEWFGLGSRVIITTRDKHLLACHRVESTYEVQQLNKEKALELLKWKAFKNKQVSPSFMDILNYAVTYASGLPLALEVIGSHLFGKSVEEWKSALDQYKRIPHDEIQNILKVSFDALGEEEKSVFLDIACSFKGYKLVEVEEILCAHYGGCMKYHIGVLVEKSLIKSWFGSVTMHDLIEDMGKEIVRQESPKHPGKRSRLWSPTDIVKVLKENTKFMNVTILSFDWCECLTTIPDVSDLLNVEQFSFKHCCTSLVSFPEILAEMKNITELKLNDINIKEFPFSFRNISQLQLLMLKKIGTNFQLPSSICMMSELVEICISDGRAEPFIKEDEGEEKVSSIMSSNLQRLQLSSMTINLCNSNLLDEFLAICLRRFANIKELDLSYSGFTIIPECIKECHFLWKLDLKRCLQLQEIRGIPPNLKYLSAEECDSLSSWSRSMLLNEEVHEAGDTLFYLPSPKQRRIPEWFEHQKMGLSTSFSFCNKFPHIAFCLAAHSCSNAYEWNGTFSVDVIINGKKFECFKVSSSHGLCHTHLVHMLTVDEALLENERSHANNEFPFLIRGGTFLMRPVPLSKEECTSIKGRVLMGEYDHNLDEAVFKNEWNHVEIKVTIKRPTFMQIGIHVLKEKNSMEDIRLPDNKDDFETIDQLANIIFVVPALADFFIKRKEVEEKLRSMLSSNFECLDLSGCHLSNQCFPIGLIGFPNLKELNLSKNDFTYVPECFKEWHFLEKLQLDYCENLENIYGIPPSLRYLSIKGCNSLWLWDTDMLMLLKQELHEAGNTYFCLPRMWILEWIEHREKELYKGGNSDVWLPGSGIPEWFEHQRMGLSTSFWFRNKFPNISLCLALYCPQTLWCFHVIVIINGKEFKYMEEFGFNKLDNTYLFNVQKEKFKFDKALLEHEWNHVEIKIHSDSPIKVESGIHIFKEKSSMEDICFTDPHRKLDFNLPPLPENDEKLDLSLAPLLEK. 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05204 1282 Gene3D - 180 347 IPR027417 -
Seca9g05204 1282 Gene3D Ribonuclease Inhibitor 518 766 IPR032675 -
Seca9g05204 1282 Pfam NB-ARC domain 203 424 IPR002182 GO:0043531
Seca9g05204 1282 SMART till_3 16 156 IPR000157 GO:0007165
Seca9g05204 1282 Gene3D - 352 436 IPR042197 -
Seca9g05204 1282 Pfam TIR domain 17 184 IPR000157 GO:0007165
Seca9g05204 1282 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Seca9g05204 1282 Gene3D - 14 179 IPR035897 -
Seca9g05204 1282 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 786 IPR044974 GO:0006952
Seca9g05204 1282 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
Seca9g05204 1282 PRINTS Disease resistance protein signature 218 233 - -
Seca9g05204 1282 PRINTS Disease resistance protein signature 294 308 - -
Seca9g05204 1282 PRINTS Disease resistance protein signature 387 401 - -
Seca9g05204 1282 PRINTS Disease resistance protein signature 690 706 - -
Seca9g05204 1282 Gene3D Ribonuclease Inhibitor 961 1094 IPR032675 -
Seca9g05204 1282 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Seca9g05204 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 446 IPR027417 -
Seca9g05204 1282 SUPERFAMILY L domain-like 491 1090 - -
Seca9g05204 1282 SMART AAA_5 215 349 IPR003593 GO:0016887
Seca9g05204 1282 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05204 Seca-Chr9 156172963 156178124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05204 195 536 WRKY Transcription Factor Family AT5G45050 35.159 3.71e-50 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05204 - - vra:106764825 858.596