Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05179 ATGGCTTCCTATAACACAATTCTCTTCCTCTTAATCCTTGTTAGCTTCCTCTGTTTTGCAACAACTGAGGCACAAGACGACCCTTTTTATCTCTACCAAGATTGCTCCAGCGACAAAACCAATGCCAATACCTCCTTCCAATTAAATCTCAACACCCTCCTCTCTTCCTTACCATCCAACGCCACGGGCAACACCCAATTCTACAACACCACATTCATTGGAAATAACCCCTCTGACACAATCTATGCCATGTTCATGTGTAGGGGTGATGTTCCCTCTAACCTCTGTCAACAATGCATCATAAATGCAACCCACCGACTATCCTCAGAGTGCCCCTTATCCAAACAAGCTACAATTTGGTACGAAGAGTGTATGGTTTGGTATTCCACCACCTCTATCTTCTCCACCTTAGCCACATCCCCTAGCTTCCACATGCAAAACAGTGGCAACGTGTCAAACCCAGAAAGCTTCAAACTTTCATTGTTTTCAACAATGAACCAAACCGCAGAAGAAGCAGCAAATTCTCCTTACAAGAAGTTTGCCACAAAGGAAGTAAATGTAACCGTCTCAGGGTTTCAAACCCTTTACTTTCTAGCTCAGTGCACACCGAACCTTTCACCACACGATTGCAGAACGTGTCTCAGTGAAATGATAGGGGACATTCCATCTTGCTGTGAAGGAAGACTTGGAGGAAGAGTTCTATGTCCTAGCTGTAACATTAGATATGAACTCTACCCTTTTTATCACACCATTGTTCCGTCACCAAAGCCTGCACCAGCAATAGTTCCTGCAACAAACACCTCACATGCAGATTCAGAATTTTCTGAAGACTCTGTTTACCTTTCCCACAATTGCTCAACTAAATACAACTTCACTGCCAATAGCACTTTTGAAACAAACCTCAAGACTCTTCTCTCTTACTTGTCTTCCAATGCAACCAGTGACAAGAAATTTCATAAGGTTAATGTCACAAACAAAGTGTATGGTCTCTTCATGTGCCGAGGTGACCTTCCCTCTCCTCTATGTGGAAAATGCGTCCAAAACGCAACGGATCGAGTATCGTCAGAGTGTCGTTTATCCCAAGAGGGTATAATTTTGTACAGCCACTGTATGCTTCGCTATTCCTATAGGAATTTCTTCTCAAAAGTGGACACAAGTGTTGTATATTCAGATTTGAATACCACTAGTACTTCCATCCCCAAAGAGGAACAAGATTACTTCATTGTTACATTAGCGAAAACGCTAGATAAAGCGGCAATTCAGGCAGGGGATAGTGATAGGAGATATGGAACAAAATCAAAAAAATTGAATGATGTCCAAACTCTTTATGCACTTGGTCAATGTACTCAGGATTTGTCTATTAATGATTGCAAAGGTTGTCTTGGAGAAGTGATTGGAACAGCAATTCCATGGTCTCGTTTGAGAAGCGTAGGGGGAAGAGTTATGTATCCTAGCTGCAATCTCAGGTTTGAATTGTTTCAATTTTACAGGGATGTTGGTGACCAAGCTCGATCACCCAGCCCAGAAAAGAAAGATGATCAATCGCGAACAATTGCGATTGTTGTGGCCATAATTGTTTTCGTGATATTCTTCTCTTTTGGCTACTACTTGCTAAGGAGAAAAACAAAAAAAAGTTATAAGAATACTCTCAAAGAAAACTTTGGCCAGGAATTTGCGGCTTTAGAGGCATTGCAATTTGATTTGACTATAATTCAAGCAGCAACCAACAACTTTGCAAGTGAAAATATGATTGGTAAAGGCGGATTTGGAGAAGTTTACAAGAATGAAATTTTATTGATAGCCAAGCTCTACCATAGAAATCTAGTGGCATTCATTGGTTTCTGCCTTGAAGAACAAGAGAAAATACTTATTTACGAATATGTGCCAAACAAGAGCCTTGATTACTTTTTATTTGATTCTCATCGACAAAAGTTGTTAAGCTGGTTTGAACGTTACAATATTATAGGAGGGATTGCTCGAGGAATTCATTATTTACATGAACATTCTCGACTCAAAATTATACATCGTGATCTCAAACCTAGTAATGTTCTACTAGATGAAAATATGGTTCCAAAAATTTCAGATTTTGGTCTAGCTAGAATTGTCGAAATAAATCAAGACCAAGGAAGTACAAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCTGAGAAAACAGATGTTTTTAGTTTTGGAGTCATGGTTTTAGAGATTATTACAGGAAAAAAGAATCTAAGCTCTTATGAATCACATCGTGTGGTTGATGGTCTCCTAAGTTATGTTTGGAAACAATGGAAGGAGCAAACTCCATTGAGAACATTGGACCCGGATATTGAAAAGAATTATTCTGAAATTGAAGTTCTTAAATGCATTCAAATTGGTTTATTATGTGTTCAACATAACCCTGATGATAGACCTGCAATGGCAACCATTGTTTCTTATCTTAGTAGGCATTTTATTGAATTGCCGACACCACAAGAACCTGCATTTTTCTTGCACGGTAGAATGGATGCAAAAATATTTGCACAGGAATCAAGTTCTAGTCAATCTATCAACACTTCCACACCATTCTCTATCAATCAAATGCCTATAACTGAGCTTATTCCTCGATAA 2640 0.3894 MASYNTILFLLILVSFLCFATTEAQDDPFYLYQDCSSDKTNANTSFQLNLNTLLSSLPSNATGNTQFYNTTFIGNNPSDTIYAMFMCRGDVPSNLCQQCIINATHRLSSECPLSKQATIWYEECMVWYSTTSIFSTLATSPSFHMQNSGNVSNPESFKLSLFSTMNQTAEEAANSPYKKFATKEVNVTVSGFQTLYFLAQCTPNLSPHDCRTCLSEMIGDIPSCCEGRLGGRVLCPSCNIRYELYPFYHTIVPSPKPAPAIVPATNTSHADSEFSEDSVYLSHNCSTKYNFTANSTFETNLKTLLSYLSSNATSDKKFHKVNVTNKVYGLFMCRGDLPSPLCGKCVQNATDRVSSECRLSQEGIILYSHCMLRYSYRNFFSKVDTSVVYSDLNTTSTSIPKEEQDYFIVTLAKTLDKAAIQAGDSDRRYGTKSKKLNDVQTLYALGQCTQDLSINDCKGCLGEVIGTAIPWSRLRSVGGRVMYPSCNLRFELFQFYRDVGDQARSPSPEKKDDQSRTIAIVVAIIVFVIFFSFGYYLLRRKTKKSYKNTLKENFGQEFAALEALQFDLTIIQAATNNFASENMIGKGGFGEVYKNEILLIAKLYHRNLVAFIGFCLEEQEKILIYEYVPNKSLDYFLFDSHRQKLLSWFERYNIIGGIARGIHYLHEHSRLKIIHRDLKPSNVLLDENMVPKISDFGLARIVEINQDQGSTNRIVGTYGYMSPEYAMLGQFSEKTDVFSFGVMVLEIITGKKNLSSYESHRVVDGLLSYVWKQWKEQTPLRTLDPDIEKNYSEIEVLKCIQIGLLCVQHNPDDRPAMATIVSYLSRHFIELPTPQEPAFFLHGRMDAKIFAQESSSSQSINTSTPFSINQMPITELIPR. 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05179 879 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 264 875 - -
Seca9g05179 879 Pfam Salt stress response/antifungal 149 245 IPR002902 -
Seca9g05179 879 Pfam Salt stress response/antifungal 285 375 IPR002902 -
Seca9g05179 879 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Seca9g05179 879 Pfam Salt stress response/antifungal 410 491 IPR002902 -
Seca9g05179 879 Gene3D Phosphorylase Kinase; domain 1 538 594 - -
Seca9g05179 879 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 278 378 - -
Seca9g05179 879 ProSiteProfiles Protein kinase domain profile. 543 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05179 879 SUPERFAMILY Protein kinase-like (PK-like) 565 861 IPR011009 -
Seca9g05179 879 FunFam cysteine-rich receptor-like protein kinase 10 628 831 - -
Seca9g05179 879 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 28 132 - -
Seca9g05179 879 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Seca9g05179 879 FunFam Cysteine-rich receptor-like protein kinase 25 388 495 - -
Seca9g05179 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672|GO:0006468
Seca9g05179 879 Gene3D Phosphorylase Kinase; domain 1 595 627 - -
Seca9g05179 879 Pfam Protein kinase domain 592 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05179 879 Gene3D - 384 495 IPR038408 -
Seca9g05179 879 Gene3D - 277 379 IPR038408 -
Seca9g05179 879 Gene3D - 28 132 IPR038408 -
Seca9g05179 879 Gene3D - 139 247 IPR038408 -
Seca9g05179 879 ProSiteProfiles Gnk2-homologous domain profile. 139 247 IPR002902 -
Seca9g05179 879 CDD STKc_IRAK 584 826 - -
Seca9g05179 879 SMART serkin_6 578 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05179 879 FunFam Cysteine-rich receptor-like protein kinase 25 141 247 - -
Seca9g05179 879 ProSiteProfiles Gnk2-homologous domain profile. 389 495 IPR002902 -
Seca9g05179 879 Gene3D Transferase(Phosphotransferase) domain 1 628 831 - -
Seca9g05179 879 ProSiteProfiles Gnk2-homologous domain profile. 279 379 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05179 Seca-Chr9 155216871 155222679 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05179 275 879 Receptor kinase-like Gene Family AT4G05200 40.426 1.99e-157 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca9g05179 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05179 - - gmx:100806048 1187.56