Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05173 ATGATTCCAAAAATCTCAGATTTTGGTTTGGCCAGAATTGTTGAAATAAATGTAGACAAAGGAAATACAAATAGAGTTGTTGGGACATTAGGTTATATGTCTCCAGAATATGCAATGCTTGGGCAATTTTCTGAGAAATCAGATGTTTACAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGAAAAAAAGAATGTGAGTTCTTATGAATCATGTGTTGGTGATAGCCTCCTAAGTTATGTTTGGAGACAATGGAAGGATCAAATACCATTAAGTTTATTGGATCCAAATATTAAAGGAATTTATTCCGAAATTGAAGTCATTAGATGCATTCAAATTAGTTTATTATGCGTCCAACAAATGCCTAATGCTAAACCAACAATGGCAACAATTGTTTCATATCTTAGCAACCACCTTATTGAATTGTCAGCTCCTGAAGAACCTGCATTTTTCTTCCATGGTAAAATGGATTCTAAAGCAACTGTACAGGAATCAAGTTCTAGTCAATCTATTAATAATTCCACACCATTGACCATCAATAACATGTCTATAAGTGAAATTATTCCTCGATAG 573 0.3298 MIPKISDFGLARIVEINVDKGNTNRVVGTLGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITEKKNVSSYESCVGDSLLSYVWRQWKDQIPLSLLDPNIKGIYSEIEVIRCIQISLLCVQQMPNAKPTMATIVSYLSNHLIELSAPEEPAFFFHGKMDSKATVQESSSSQSINNSTPLTINNMSISEIIPR. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05173 190 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05173 190 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 186 - -
Seca9g05173 190 SUPERFAMILY Protein kinase-like (PK-like) 2 171 IPR011009 -
Seca9g05173 190 Pfam Protein tyrosine and serine/threonine kinase 4 90 IPR001245 GO:0004672|GO:0006468
Seca9g05173 190 Gene3D Transferase(Phosphotransferase) domain 1 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05173 Seca-Chr9 155149021 155150925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05173 1 190 Receptor kinase-like Gene Family AT4G11480 47.644 3.51e-54 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca9g05173 PK_Tyr_Ser-Thr 2.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05173 - - gmx:100806048 270.011