Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05164 ATGCCTCTCAATCGAAGAACAAACGAGAAAATGGAGGAAGCTCAAGGGTCTTCACCGTTCACTAACTCAGGGCTTAGGAAATTTTATTCTGGGTTCATGAATTTGAATATGGATGAATTTTGTGAAGGTTCATGTATTAACCTTGATGACGATAATGTAGATATTAATGATACTGGTGTTGAATTTGATGTAAACCGTAGTGAAGATGAAAATGATTTGGGTGGTCCTAGTGGGGAGGAAGAGTTAGGTAGGATGGATAATAGCGGTAAAAGAATGGAAGATTTGACTCCTGTTGATATTCGAAACATGGAGTTTGCTAGTGAAGATCATGGGGAGATATTTTATAGGGCATATGCAAAGCGTCATGGATTTGTTGTTAGAAAGGATGAAATTGATCGGGACATTAAGGGCAATGTTATTATGCGTCAGTTCGTTTGCAACAAAGAGGGTAGTAGGAACAAAAAACATTTGATGAGGGTGGATAGGAAAAAAGAACATAGGCCATTGACGCGTCTGGATTGTCAAGCTAAGATACGAATTCGCTTAGATTATAAGACAGATAAATGGAAAGTGGTTTCTTTCGTGGAGACCCACAATCATGAGCTTACCCCTTCTACTTTTGTGCACTTACTACCTAGTAATAGAGGGTTGAATAATGCTGATAAAGCCCAAGATGAAGGAAACATATCATTAGATGAAGTCAATGTTGATGGCATGGAGCCAAGTGACCAAGATCAAAGACTAAACAATAATGAAGTGAATGTGAAAATTAGTGGTAGACATAAAGGGAAGGAGAAGGACTGCACCCAAAATGTGGAAGTGAAAGTGTGTGGTAGTCATGAAGGGCAGAAAAAACAATTCTCACAAGATGTGGAAGTGAAAGTTAGTGGTATTCATGAAGGGAAGGAGAAGGAATGCACCCAACAAGTGGAAGTGAAAGTCAGTGGTAGTCATGATGGGAAGGCTAGGGAGTGCACACAAAATGTTATTTTGAATCATAATGTGGGTAATAAAGGGAAGAAAAAGGAGGTTCATGTCTTGCCACAAAATTCAGTCCAAAACTTTGTAAGTCCAAAACAGGAGAAATTTCGTCCTATTGCTCCTTCTTTTATGCGCCCCTTTCACAACTCTATATTTGGTCCTGGTATGCCAAGCCAAACGATGCCTATGCCCCATCCTCAGTATGGTTATGTTCCTATGTACCCATCCGGTTATCCCATGGTTTACCCTAATATGGTTATGCAAAACCCCCAGAAAGCTCCCACTGGTACTTCTTTGGATTATTTGCGTGGTGTAGTCAATAATAATGGAAAAGGAGAAGGAAGCAAACCAACTGAGCATATGAAAAACATGGATTGA 1359 0.3974 MPLNRRTNEKMEEAQGSSPFTNSGLRKFYSGFMNLNMDEFCEGSCINLDDDNVDINDTGVEFDVNRSEDENDLGGPSGEEELGRMDNSGKRMEDLTPVDIRNMEFASEDHGEIFYRAYAKRHGFVVRKDEIDRDIKGNVIMRQFVCNKEGSRNKKHLMRVDRKKEHRPLTRLDCQAKIRIRLDYKTDKWKVVSFVETHNHELTPSTFVHLLPSNRGLNNADKAQDEGNISLDEVNVDGMEPSDQDQRLNNNEVNVKISGRHKGKEKDCTQNVEVKVCGSHEGQKKQFSQDVEVKVSGIHEGKEKECTQQVEVKVSGSHDGKARECTQNVILNHNVGNKGKKKEVHVLPQNSVQNFVSPKQEKFRPIAPSFMRPFHNSIFGPGMPSQTMPMPHPQYGYVPMYPSGYPMVYPNMVMQNPQKAPTGTSLDYLRGVVNNNGKGEGSKPTEHMKNMD. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05164 452 MobiDBLite consensus disorder prediction 1 20 - -
Seca9g05164 452 MobiDBLite consensus disorder prediction 63 92 - -
Seca9g05164 452 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 46 284 - -
Seca9g05164 452 Pfam FAR1 DNA-binding domain 114 203 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05164 Seca-Chr9 155050798 155056639 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g05164 FAR1 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05164 - - ccaj:109792835 171.014