Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05158 ATGATAGCCAAGCTCCAACATAGAAATCTAGTGGAATTCATTGGTTTTTGCCTTAAAGAACAAGATAAAATACTTATTTACGAATATGTGCCAAACAAGAGCCTTGATCATTTTTTATTTGACTATCAGCGGCCAAAATTCTTAAGCTGGTTTGAACGTTACAATATTATAGGAGGAATTGCTCAAGGGATTCTCTACTTACATGAGCATTCTCGACTCAAAATTATACATCGTGATCTTAAACCTAGTAATATTCTTTTAGATGAAAATATGATTCCAAAAATCTCAAATTTTGGTTTGGCCAGAATTGTTGAAATAAATGTAGACAAAGGAAATACAAATAGAATTGTTGGGACATTAGGTTATATGTCTCCAGAATATGCAATGCTTGGGCAATTTTCTGAGAAATCAGATGTTTACAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGGAAAAAAGAATGTGAGTTCTTATGAATCATGTGTTGTTGATAGCCTCCTAAGTTATGTTTGGAGACAATGGAAGGATCAAATACCATTAAGTTTAATTGGATCCAAATATTAA 567 0.321 MIAKLQHRNLVEFIGFCLKEQDKILIYEYVPNKSLDHFLFDYQRPKFLSWFERYNIIGGIAQGILYLHEHSRLKIIHRDLKPSNILLDENMIPKISNFGLARIVEINVDKGNTNRIVGTLGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITGKKNVSSYESCVVDSLLSYVWRQWKDQIPLSLIGSKY. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05158 188 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05158 188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Seca9g05158 188 SMART serkin_6 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05158 188 FunFam Lectin-domain containing receptor kinase A4.3 30 187 - -
Seca9g05158 188 SUPERFAMILY Protein kinase-like (PK-like) 2 161 IPR011009 -
Seca9g05158 188 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 184 - -
Seca9g05158 188 Gene3D Transferase(Phosphotransferase) domain 1 1 181 - -
Seca9g05158 188 Pfam Protein kinase domain 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05158 Seca-Chr9 154835460 154837268 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05158 1 184 Receptor kinase-like Gene Family AT4G11530 62.032 1.67e-79 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca9g05158 Pkinase 5.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05158 - - gmx:100806048 317.39