Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05156 ATGGCTGCTTCCCATACGATTCTCTATCTCTTCATCCTTGTTAGCATCCTCACTTTTGCAAAAGCACAAGATGACCCTTTTTATCTCTACCAATACTGCTCCAGCAACAGAACCACAGCCAATACCTCCTTCCAATCCAACGTCAACACCCTCCTTTCCTCCCTATCATCCAACGCCACCGGCAACACTCAATTCTACAACACAACATTCACAGGAAATAACCCCTCTGACACAATTTATGGCCTATTCATGTGTAGGGGTGACGTTCCCTCTCACCTCTGCCAAAAATGCATAGTAAACGCAACCCAGCGTCTCTCCTCAGAGTGCTCTTTGTCCAAAGAAGGTTCAATTTGGTACGACGAGTGCTTAGTTTGGTACTCCACAAGCTTCATCTTCTCCACCATTTCCACAACGCCTAATTTTGCTATGTTGAACACCGACAGAGTCTCAAATCCAAAAAGCTTCATGCGCTTATTGTTTCTAACCATGAACGAAACTGCAGATGAAGCATCCCGTCCTCAAATTGGTGAGAAGAAATTCGCCACAAGGGAAGCAACTTTCTCCGGATTTGAGACTCTTTATTGCCTTTCTCAGTGCACACAAGACCTTTCACCCCAAGATTGCAGAACATGTCTCAGTGGAATCATAGCGCAACTTCCATCGTGTTGTGAAGGAAGAGTGGGAGGAAGAGTTTTAAATCCTAGTTGTAACATTAGGTACGAATTCTACCCTTTCTATATTGCATCACCAAAGCCTGCATCAACACCAACGCTAGTTCCTATAACAAATAATTCAGATGCAGATTCAAGATTTTCAGAAGATCCTGTTTATCTTTCCCATAACTGCTCAACTAACACAATCTTCAATTCCAATAGCACTTTCAAAATACACCTCACCACTCTCCTTTCCTACTTGTCTTCTAACTCCACCAACGGCAAGAATTTTCATAAAGCTGACGTGGCAAACACAGCGTTTGGCCTCTTCATGTGCCGAGGTGATGTTCCTTCTCGCCTCTGCGGTGAATGTGTACAAAACGCAACGCAGAGAATATCCTCAGAGTGTGGCGCATTCCAAGAGGGTATAATTTGGTATAGCCATTGTTTGGTTCGCTATTCATATCAGAATTTCTTCACCAAAGTGGATAAAAGTCCTATATATTCTGAGTTGAATGTCACTAGTAGCTCCAGCCCCAATCCGGAGAGGAACTACTTCAATTTTGTATTATCTAATGCGTTATCAAAAGTGGCAATTATTGCAGGGGATAGTGATGCGAGATATGGAACAAAATCATTGAAATTGAATGATTTGCAAACACTTTATACTCTTGGTCAGTGTACGCAGGATTTGTCTAGTGATGATTGCAAGGGCTGTTTGGGAGATATAATTGGACCAGCGATTCCATGGCCTCGTTTGGGAAGTGTAGGGGGAAGAGTTCTATATCCTAGCTGCAATCTCAGGTTTGAGTTGGTTCAATTTTACAGGGATAGTAACAAAACTACCAGACCAAGTAGTCCTTCTCCATCAGTTGGTCATGAAAGTGCCACTTTAGAACCGTTGCAATTGGAATTAGCTATAATTGAAGATGCAACCAACAACTTTTCAGTTGAGAATTGCATTGGAAAAGGTGGATTCGGAGAAGTTTACAAGGGCAATCTTCCTGATGGACGACTAATAGCAGTAAAAAGACTCTCAAGAAGCTCTAAACAAGGTGCAACAGAGTTCAGGAATGAAGTTTTATTGATAGCCAAGCTCCAACATAGAAATCTAGTGGCATTCGTTGGTTTTTGCCTTGAAGAAGAAGAGAAAATACTCATTTACGAATATGTCCCAAACAAGAGCCTTGATCATTTTTTATTTGACTATCAGCGGCCAAAGTTCTTAAGTTGGTTTGAACGTTACAATATTATAGGAGGAATTGCTCAAGGGATTCTTTACTTACATGAGCATTCCCGACTCAAAGTTATACATCGTGATCTTAAACCTAGTAATATTCTTTTAGATGAAAATATGATTCCAAAAATCTCAGATTTTGGTTTGGCCAGAATTGTTGAAATAAATGTAGACAAAGAAAGTACAAATAGAGTTGTCGGGACATTAGGTTATATGTCTCCAGAATATGCAATGCTTGGGCAATTTTCTGAGAAATCAGATGTTTATAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGGAAAAAAGAATGTGAGTTCTTATGAATCACGTGTTGGTGATAGCCTCGTTTGGAGACAATGGAAGGATCAAATACCATCGAGTTTATTGGATCCAAATATTAAAGGAAGTTATTATGAAATTGAAGTCATTAGATGCATTCAAATTGGTTTATTATGCGTCCAACAAATGCCTAATGCTAGACCAACAATGGCAACAATTGTTTCATATCTTAGCAATCACTTTATTGAATTGCCAACTCCTGAAGAACCTGCATTTTTCTTCCATGTAAACGCAACCCAGCGTCTCTCCTCAGAGTGCTCTCTGTCCAAAGAAGGTGCAATTTGGTACGACGAGTGCTTGGTTTGGTACTCCACAAGCTTCATCTTCTCCACCGTTTCCACAAAGCCCAATTTCGCTCTGTTGAACACCGACGGAGTCTCAGACACAAAAAGCTTCATGCGTTTATTGTTTCTAACCATGAATGAAACTGCAGATGAAGCATCCCGTCCTCAAATTGGTGAGAATAAATTCGCAACAAGGGAAGCAAATTTCTCAGGATTTGAGACTCTTTATTGTCTTTCTCAGTGCACACAAGACCATTCACCCCGTGATTGCACAACATGTCTCAGTGGAATCATAGCGCAACTTCCATCGTGCTGTGAAGGAAGAGTGGGAGGGAGAGTTTTAAATCCTAGCTGTAACATTAGGTACGAATTCTACCCTTTCTATATTGCATCACCAAAGCTTGCATCAGCACCAACGCTAGTTCCTATAACAAATAATTTAGATGCAGATTCAAGATTTTCAGAAGATCCTGTTTATCTTTCCCATAACTGCTCAACTAACACAATCTTCAATTCCAATAGCACTTTCAAAATACACCTCACCACTCTCCTTTCCTACTTATCTTCTAACTCCACCAACGACAATAATATTCATAAGGCTGACGTGGCAAACACAGTGTTTGGCCTCTTCATGTGCCGAGGTGATGTTCCTTCTCCCTTCTGCGAAAAATGCGTACAAAACGCAACACAGAGAATATCCTCAGAGTGTGGCGCATTCCAAGAGGGTATAATTTGGTACAACCACTGTTTGGTTCGCTATTCCTATAAGATTTTCTTCATGAAAGTGGATAAAAGTCCTATATATTCTGAGTTGAATGTCACTAGTAGCTCCAGCCCCAATCCGGAGAGGAACTACTTCAATTTTGTATTATCGAATGCGTTATCAAAAGTGGCATATATTGCAGGGGATAGTGATGCGAGATATGGAACAAAATCATTGAAATTGAATGATTTGCAAACACTTTATACTCTTGGTCAGTGTACGCAGCATTTGTCTAGTGATGATTGCAAGGGTTGTTTGGGAGATATAATTGGACCAACGATTCCATGGCTTCGTTTGGGAAGTGTAGGGGGAAGAGTTCTATATCCTAGCTGCAATCTCAGGTTTGAGTTGGTTCAATTTTACAGGGCTAGTAACGAAACTACTACACCAAGTAGTCCTTCTCCATCAGACCAACAAGGGTGGGTTCAAGTGCTACATTCTTGA 3723 0.4067 MAASHTILYLFILVSILTFAKAQDDPFYLYQYCSSNRTTANTSFQSNVNTLLSSLSSNATGNTQFYNTTFTGNNPSDTIYGLFMCRGDVPSHLCQKCIVNATQRLSSECSLSKEGSIWYDECLVWYSTSFIFSTISTTPNFAMLNTDRVSNPKSFMRLLFLTMNETADEASRPQIGEKKFATREATFSGFETLYCLSQCTQDLSPQDCRTCLSGIIAQLPSCCEGRVGGRVLNPSCNIRYEFYPFYIASPKPASTPTLVPITNNSDADSRFSEDPVYLSHNCSTNTIFNSNSTFKIHLTTLLSYLSSNSTNGKNFHKADVANTAFGLFMCRGDVPSRLCGECVQNATQRISSECGAFQEGIIWYSHCLVRYSYQNFFTKVDKSPIYSELNVTSSSSPNPERNYFNFVLSNALSKVAIIAGDSDARYGTKSLKLNDLQTLYTLGQCTQDLSSDDCKGCLGDIIGPAIPWPRLGSVGGRVLYPSCNLRFELVQFYRDSNKTTRPSSPSPSVGHESATLEPLQLELAIIEDATNNFSVENCIGKGGFGEVYKGNLPDGRLIAVKRLSRSSKQGATEFRNEVLLIAKLQHRNLVAFVGFCLEEEEKILIYEYVPNKSLDHFLFDYQRPKFLSWFERYNIIGGIAQGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEINVDKESTNRVVGTLGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITGKKNVSSYESRVGDSLVWRQWKDQIPSSLLDPNIKGSYYEIEVIRCIQIGLLCVQQMPNARPTMATIVSYLSNHFIELPTPEEPAFFFHVNATQRLSSECSLSKEGAIWYDECLVWYSTSFIFSTVSTKPNFALLNTDGVSDTKSFMRLLFLTMNETADEASRPQIGENKFATREANFSGFETLYCLSQCTQDHSPRDCTTCLSGIIAQLPSCCEGRVGGRVLNPSCNIRYEFYPFYIASPKLASAPTLVPITNNLDADSRFSEDPVYLSHNCSTNTIFNSNSTFKIHLTTLLSYLSSNSTNDNNIHKADVANTVFGLFMCRGDVPSPFCEKCVQNATQRISSECGAFQEGIIWYNHCLVRYSYKIFFMKVDKSPIYSELNVTSSSSPNPERNYFNFVLSNALSKVAYIAGDSDARYGTKSLKLNDLQTLYTLGQCTQHLSSDDCKGCLGDIIGPTIPWLRLGSVGGRVLYPSCNLRFELVQFYRASNETTTPSSPSPSDQQGWVQVLHS. 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05156 1240 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Seca9g05156 1240 Pfam Salt stress response/antifungal 401 488 IPR002902 -
Seca9g05156 1240 Pfam Salt stress response/antifungal 152 242 IPR002902 -
Seca9g05156 1240 Pfam Salt stress response/antifungal 873 963 IPR002902 -
Seca9g05156 1240 Pfam Salt stress response/antifungal 1122 1209 IPR002902 -
Seca9g05156 1240 Pfam Salt stress response/antifungal 282 372 IPR002902 -
Seca9g05156 1240 Pfam Salt stress response/antifungal 1003 1093 IPR002902 -
Seca9g05156 1240 MobiDBLite consensus disorder prediction 1219 1240 - -
Seca9g05156 1240 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Seca9g05156 1240 Gene3D - 385 492 IPR038408 -
Seca9g05156 1240 Gene3D - 859 966 IPR038408 -
Seca9g05156 1240 Gene3D - 995 1097 IPR038408 -
Seca9g05156 1240 Gene3D - 274 376 IPR038408 -
Seca9g05156 1240 Gene3D - 1106 1213 IPR038408 -
Seca9g05156 1240 Gene3D - 26 130 IPR038408 -
Seca9g05156 1240 Gene3D - 137 245 IPR038408 -
Seca9g05156 1240 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
Seca9g05156 1240 ProSiteProfiles Protein kinase domain profile. 533 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05156 1240 FunFam cysteine-rich receptor-like protein kinase 10 609 808 - -
Seca9g05156 1240 ProSiteProfiles Gnk2-homologous domain profile. 858 966 IPR002902 -
Seca9g05156 1240 ProSiteProfiles Gnk2-homologous domain profile. 26 131 IPR002902 -
Seca9g05156 1240 FunFam Cysteine-rich receptor-like protein kinase 25 1105 1213 - -
Seca9g05156 1240 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 996 1096 - -
Seca9g05156 1240 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 275 375 - -
Seca9g05156 1240 FunFam Cysteine-rich receptor-like protein kinase 25 384 492 - -
Seca9g05156 1240 FunFam Cysteine-rich receptor-like protein kinase 25 139 245 - -
Seca9g05156 1240 Gene3D Transferase(Phosphotransferase) domain 1 609 808 - -
Seca9g05156 1240 ProSiteProfiles Gnk2-homologous domain profile. 276 376 IPR002902 -
Seca9g05156 1240 ProSiteProfiles Gnk2-homologous domain profile. 1107 1213 IPR002902 -
Seca9g05156 1240 ProSiteProfiles Gnk2-homologous domain profile. 997 1097 IPR002902 -
Seca9g05156 1240 SUPERFAMILY Protein kinase-like (PK-like) 518 826 IPR011009 -
Seca9g05156 1240 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 26 130 - -
Seca9g05156 1240 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 496 608 - -
Seca9g05156 1240 Pfam Protein kinase domain 534 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05156 1240 Gene3D Phosphorylase Kinase; domain 1 497 608 - -
Seca9g05156 1240 ProSiteProfiles Gnk2-homologous domain profile. 137 245 IPR002902 -
Seca9g05156 1240 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 10 255 - -
Seca9g05156 1240 ProSiteProfiles Gnk2-homologous domain profile. 386 492 IPR002902 -
Seca9g05156 1240 FunFam Cysteine-rich receptor-like protein kinase 25 860 966 - -
Seca9g05156 1240 CDD STKc_IRAK 539 801 - -
Seca9g05156 1240 SMART serkin_6 533 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05156 Seca-Chr9 154771088 154779455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05156 818 967 Receptor kinase-like Gene Family AT4G23150 35.484 2.33e-17 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca9g05156 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05156 - - gmx:100806048 1199.11