Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05148 ATGGTTCAAGTTCTCCCCACTTCATCCCTAGTCTTTACTGTAAGGAGGCAACCACCAGAGCTAGTGATCCCAACAAACCTCACTCCCCATGAGCTCAAGCTGCTATCTGACATTGATGACCAAAATGGTCTACGTTGTCATATTCCAATAGTAAACTTCTATCCTTACCAACCTTCAATGGTAGGGAAAGACCTTGTTCAAGTCATTAAACAAGCACTTGCCAAAACACTTGTATTTTACTATCCCTTCGCAGGAAGGCTTAGGGAAGGTCTTAACGACAAACTAATGGTGGATTGCGCTGGTGTGATATTCATTGAGGGTGATGCAGATGTGACACTTGAGCAGTTTGGTGACAATATCATGCCCCCATTTCCTTGCTTTGATGAGCTCCTTTACAATGTTCCAGGCTCAGATGGAATTATTGACTGTCCCCTCCTGCTTATTTAG 447 0.4362 MVQVLPTSSLVFTVRRQPPELVIPTNLTPHELKLLSDIDDQNGLRCHIPIVNFYPYQPSMVGKDLVQVIKQALAKTLVFYYPFAGRLREGLNDKLMVDCAGVIFIEGDADVTLEQFGDNIMPPFPCFDELLYNVPGSDGIIDCPLLLI. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05148 148 Pfam Transferase family 20 147 - -
Seca9g05148 148 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 147 - -
Seca9g05148 148 Gene3D - 13 148 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05148 Seca-Chr9 154526218 154526664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05148 45 148 Monolignol Biosynthesis Gene Families AT5G48930 37.383 1.23e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05148 K19861 - gmx:100795237 231.491