Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05137 ATGGCTATGGTTCTCTCAACTTCATCCTTAGCCTTTACTGTAAGGAGGCAACCACCAGAGTTAGTGGTCCCAGCAAACCCCACTCCCCATGAGCTCAAGCTGCTATCTGATATTGATGACCAAAATGGTCTATGTGATCATATTCCAATAGTAAACTTCTATCCTTACAAACCGTCAATGGCAGGGAAAGACCCTGTTCAAGTCATAAAACAAGCACTTTCCAAAACACTTGTATTTTACTATCCGTTCGCAGAAAGGCTTAGGGAAGGTCTTAACGACAAACTAATGGTGGATTGTACTGGAGAAGGTGTAATATTTATTGAGGCTGATGCAGATGTGACACTTGAGCAATTTGGTGACAATATTATGCCCCCATTTCCTTGCTTTGACGATCTCCTTTACAATGTTCCAGGCTCAGATGGAGTTATTGGCTGTCCCCTCCTACTTATTCAGGTTCCTCCATACACTCCTTGTATATGCAAAATGCATTCTGGTCTGTAA 501 0.4232 MAMVLSTSSLAFTVRRQPPELVVPANPTPHELKLLSDIDDQNGLCDHIPIVNFYPYKPSMAGKDPVQVIKQALSKTLVFYYPFAERLREGLNDKLMVDCTGEGVIFIEADADVTLEQFGDNIMPPFPCFDDLLYNVPGSDGVIGCPLLLIQVPPYTPCICKMHSGL. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05137 166 PANTHER ACYL TRANSFERASE 4 12 122 - -
Seca9g05137 166 Gene3D - 13 157 IPR023213 -
Seca9g05137 166 Pfam Transferase family 19 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05137 Seca-Chr9 152569276 152569776 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05137 47 152 Monolignol Biosynthesis Gene Families AT5G48930 40.741 1.08e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05137 K19861 - gmx:100795237 248.825