Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05129 ATGGTTCTCCAAACCTTACCTTTAACCTTCACTGTAAGAAGGCACCCACCAGAGCTAGTAGCCCCAGCAAAGCCTACACCTCATGAGCTTAAGCTTCTATCTAACATAGATGACCAAATAGGGCTACGTTACCATATTCCAATAGTACAATTCTATCGTTATGAGGCTTCTATGGCAGGGAAAGACCCTGTTCAAGTCATTAGACAAGCACTGGCCAAAACACTTGTGTTTTACTATCCACTTGCTGGAAGGCTTAGGGAAGGTCCTAACGGGAAACTAATGGTAGATTGTAATGAAGAAGGCGTCATGTTTATTGAGGCTGATGCAGATGTTACACTTGATCAGTTTGGTAACAATTTTCTGCCACCATTTCCTTGCTTGGATGAGCTGCTTTACAATGTTCCTGGTTCGGATGGCATGATCAACTGTCCCCTCCTGCTTGTACAGGTAACACGCCTCCAGTGTGGTGGTTTCATTTTCGCTCTCCGAATGAATCACACCATAAGCGACGGAAGTGGAATTTCCCAATTCCTGAGGGCATTAGCCGAAACAGCATGTGGGGCCCCCAACCCTTCCATTCTCCCACTCTGGCACAGGGAGCTTCTCTCTCCAAGGGACCCACCAAGAATCACATGCACCCACAACGAATACCAACAACTTCCTCCAGACACCAAAAGCATCTTCAAACCGCATCACCGTTCCTTCTTCTTCGGCCCCAAACATATCTCCACACTCCGTTCTCTTCTGCCTCATCACCTCGCAAAATCAACCTCCTTCGAAATCCTCACCGCATGCCTCTGGCGTAGCCGCACAAAAGCACTTCAATGGCAAAACCCAAACCAAGAGGTTCGGTTACTCTGCATCGTCAACGCACGTTACGGGCGGTGTAGCTTCAACCCTCCGTTACCTGAAGGCTTTTACGGCAACGCGTTTGTGTTTCCTGCTGCGGTTTCAACTGTAGGGAAGCTATGTAATAGGCCGTTAGAGTATGCTTTGGAATTAGTGAAAAAGGCGAAAGATGAAGCAACTGAAGAGTATGTGCATTCTGTTGTGGATTTAATGGAGATTAAGGGAAGGCCTTGTTTTACAAGGTTAGGTTCTTTTATGGTATCGGATCTGTCAAAAGCTGCTTTAAGAGATGTGGATTTTGGGTGGGGGAAGGCTGTGTATGGTGGGTTAGCTAAAGGTGGACTTGGTGATATTCCTGGAGTGAGTTTCTATGTTCCTTTTAGGAATTCTAAAGGAGACCAAGGTAGGGTGGTTCCTATTTGTCTTCCAGTGGATGCTATGGAGAGGTTTGAGAAAGAGTTGGATGATACATTCAAGATGAAGATGAGTGACAATATAATATTAATGTCCCATCTCTAA 1368 0.4583 MVLQTLPLTFTVRRHPPELVAPAKPTPHELKLLSNIDDQIGLRYHIPIVQFYRYEASMAGKDPVQVIRQALAKTLVFYYPLAGRLREGPNGKLMVDCNEEGVMFIEADADVTLDQFGNNFLPPFPCLDELLYNVPGSDGMINCPLLLVQVTRLQCGGFIFALRMNHTISDGSGISQFLRALAETACGAPNPSILPLWHRELLSPRDPPRITCTHNEYQQLPPDTKSIFKPHHRSFFFGPKHISTLRSLLPHHLAKSTSFEILTACLWRSRTKALQWQNPNQEVRLLCIVNARYGRCSFNPPLPEGFYGNAFVFPAAVSTVGKLCNRPLEYALELVKKAKDEATEEYVHSVVDLMEIKGRPCFTRLGSFMVSDLSKAALRDVDFGWGKAVYGGLAKGGLGDIPGVSFYVPFRNSKGDQGRVVPICLPVDAMERFEKELDDTFKMKMSDNIILMSHL. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05129 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 438 - -
Seca9g05129 455 Pfam Transferase family 18 438 - -
Seca9g05129 455 Gene3D - 8 215 IPR023213 -
Seca9g05129 455 Gene3D - 216 437 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05129 Seca-Chr9 152431551 152434150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05129 19 437 Monolignol Biosynthesis Gene Families AT5G48930 31.828 3.38e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05129 K19861 K13610 gmx:100795237 740.339