Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05124 ATGTGGAAAATTCTGTCTTGGGTTATGGAGGCTACTGCGATAATGGCAATTGCACTTGCCAATGGAGGGGGGAAGCCTTCTGACTGGCAAGATTTTGTGGGTATCATCACCGATCTTATCATCAATTCAACTATTAGTTTCATTGAGGAGAACAATGTTGGTAATGCTGCAGCAGCTCTCATGGCTCGTCTTGCTCCAAAAGCAAAAAGAGAGCTCCATCCATGGAGCTCACCACCTTCCTCTTGCCACAAATATCTGTTTCCAGTAATCTTTGATCCACCTAGTTTTCTCCTCACACACTCTATCATCGTTCATCTATGGAGGTTAACAAAACTGGAGAAGAAATCAGTTCCATTTCTTCCTCCCAGAGCTCCATCCAACAAACCGCAATGGAAAGTTGTTCCGGATCCTTTCACCTTTGGCGCTATCTCCTCTGTTTCTGCACAATTGAAGAAACAGAACGTGCAGAACTCGCCCATGGCAGTTGCGATAACAACCTTCAAGGACAACAAGATCGAGCAGAATATGCAAGACTTGTTCCAGGACCTGATTGTCGAGCAAGCCAATGCCTCTGTCGCTGCAGACGAAGACATCCTTGCGGTCGCGAGCCAATCGGAGCTGCCGCAACCTCCGTCCCCTCCGATCATCCAAGATCCTCCGTTGACACAGAAAATCCAAGATGCGCGAACCGACAAAAACAATCGGATCGCCGCCGAAGGAACTGTCGATTCAAAGGTGAACAGTGATCGGAGCTTCAGCAGCAACAGTAACAACGGTGGGAATCCACTTGAAGGAGGAGCGTTGTCTCCTGCCGCCCAGCACCAGCCATCTCCGGCCGCTCTGCATCTCCGTCCTTGCCCTGTCTCGGTGTCACCCAGCACCAGTGGCTATCTTCGTTCTCGGCAACGTTCACTGCAACAGTCTCTTCCTCCTTTCCTCAAAAACACCTTCTCGTGCTATGTTGGTGTTAAAAGTTTCATCCACTTGCCCCTCTCCAACAGAATCAAAGATGGCTTGCAAGAAGGCAAGTTCGTTTCTATGACCGATATACAGAGAGCTTCTAAGTTCAATGATTATTGCCACAATCATCACCCTAAGGGCGCAACTTTATTTCCTTAA 1119 0.4835 MWKILSWVMEATAIMAIALANGGGKPSDWQDFVGIITDLIINSTISFIEENNVGNAAAALMARLAPKAKRELHPWSSPPSSCHKYLFPVIFDPPSFLLTHSIIVHLWRLTKLEKKSVPFLPPRAPSNKPQWKVVPDPFTFGAISSVSAQLKKQNVQNSPMAVAITTFKDNKIEQNMQDLFQDLIVEQANASVAADEDILAVASQSELPQPPSPPIIQDPPLTQKIQDARTDKNNRIAAEGTVDSKVNSDRSFSSNSNNGGNPLEGGALSPAAQHQPSPAALHLRPCPVSVSPSTSGYLRSRQRSLQQSLPPFLKNTFSCYVGVKSFIHLPLSNRIKDGLQEGKFVSMTDIQRASKFNDYCHNHHPKGATLFP. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05124 372 PANTHER CALCIUM-TRANSPORTING ATPASE 1 69 - -
Seca9g05124 372 MobiDBLite consensus disorder prediction 240 263 - -
Seca9g05124 372 MobiDBLite consensus disorder prediction 238 286 - -
Seca9g05124 372 Gene3D - 1 73 - -
Seca9g05124 372 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 66 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05124 Seca-Chr9 152398272 152400434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05124 1 69 Primary Pumps ATPases AT2G07560 82.609 3.06e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05124 K01535 - csav:115709839 119.398