Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05122 ATGGCAAAGAAAGACCCTATTCAAGTCATTAAACAAGCACTTGCCAAAACACTTGTGTTTTACTATCCATTCGCAGGAAGGCTTAGGGAAGGTCTTAACGGCAAACTAATGGTGGATTGTACTGGAGAAGGTGTAATATTCATTGAGGCTGATGCAGATGTGACACTTGAGCAATTTGGTGACAATATTATGCCCCCATTTCCTTGCTTTGATGAGCTCCTTTACAATGTTCCAGGCTCAGATGGAATTATTGACTGTCCCCTCCTACTTATCCAGGTTACACGCCTCAAGTGCGGTGGTTTCATCTTTATTATACGAATGAACCATACTATGTGCGATGCAAGTGGAATTTCCAAGTTCCTAAAAGCTTTGGCAGAAATAGCATGTGGGGCACCAAAGCCTTCCATTCTCCCTGTGTGGGATAGGGAGCTACTATGTCCAAGAGACCCACCAAGAGTCACATACATCCATAGGGAATATGAGCAACTTTCACCTAAAACTGAAAGCATCTTCATACCCCAACATCGTTCCTTCTTCTTTGGCCTCAAAGAGATATCTGCAATTCGTACTCTTCTTCCCCATCACCTTGCTCAATCCACCTTGTTTGAGGTCCTCACCGCATTCCTCTGGCGTTGTCGCACAAAAGCATTGCAGTGGCAAAGTCCAGATCAAGAGGTTCGCTTGTTGTGCGTTGTCAATGCACGTTATGGACGTTGCAAGTTCAACCCTCCCTTACCTGATGGTTTTTATGGTAATGCGATTGTGTCTCCTATAGCGGTTACAACCGCAGGGAAGCTCTACGGTCGTCCATTAGAGTATGCCTTGGAATTAGTGAAGAAGGCAAAGAATGAAGCAATTGAGGAGTATGTGCACTCTGTCGCAGACCTAATGACCATCAAAGGAAGACCTTGCTTTGTTACATTAGGGTCCTTTATAGTATCAGATCTCTCAAAGGCAGCACTAGGAGATGTGGATTTCGGGTGGGGCAATGCTGTATATGGTGGAGTAGCAAAAGGTGGTTTTGGGAACTTTCATGGACTGAGCTACTTTGTTCCTTATACAAATTCCAAAGGAGAACATGGTAGAGTGGTTCCAATTTGCCTTCCAGAAGATTCCATGGAGAAATTTGAGAATGAGTTGGAGGGCGTACTCAAGATCAAGAAGAATAAAAATATAAAACACAACATGGTTCTGCCAACTTCATCCCTAGCCTTTACTGTAAGGAGGCAACCACCGGAGTTAGTGATCCCAGCAAACCCCACTCCCTATGAGCTCAAGCTGCTATCTGACATTGATGACCAAAATGGTCTACGTTGTCATATTCCAATGGTAAACTTCTATCCTTACTCACCTTCAATGGCAAAGAAATACCCTGTTCAAGTCATTAAACAAGCACTTGCCAAAACACTTGTGTTTTACTATCCATTCGCAGGAAGGCTTAGTGAAGGTCTTAATGACAAACTAATGGTGGATTGTATTGGAGAAGGTGTAATATTCATTGAGGCTGATGCAAATGTGACACTTGAGCAATTTGGTGACAATATTTTGCCTCCATTTCCTTGCTTTGACGAGCTCCTTTACAATGTTCCAGGCTCAGATGGAATTATTAAGCAACTTTATATAAGAGGAAAATGTGAAGTCTATAAATCAGTTTAA 1656 0.4269 MAKKDPIQVIKQALAKTLVFYYPFAGRLREGLNGKLMVDCTGEGVIFIEADADVTLEQFGDNIMPPFPCFDELLYNVPGSDGIIDCPLLLIQVTRLKCGGFIFIIRMNHTMCDASGISKFLKALAEIACGAPKPSILPVWDRELLCPRDPPRVTYIHREYEQLSPKTESIFIPQHRSFFFGLKEISAIRTLLPHHLAQSTLFEVLTAFLWRCRTKALQWQSPDQEVRLLCVVNARYGRCKFNPPLPDGFYGNAIVSPIAVTTAGKLYGRPLEYALELVKKAKNEAIEEYVHSVADLMTIKGRPCFVTLGSFIVSDLSKAALGDVDFGWGNAVYGGVAKGGFGNFHGLSYFVPYTNSKGEHGRVVPICLPEDSMEKFENELEGVLKIKKNKNIKHNMVLPTSSLAFTVRRQPPELVIPANPTPYELKLLSDIDDQNGLRCHIPMVNFYPYSPSMAKKYPVQVIKQALAKTLVFYYPFAGRLSEGLNDKLMVDCIGEGVIFIEADANVTLEQFGDNILPPFPCFDELLYNVPGSDGIIKQLYIRGKCEVYKSV. 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05122 551 Gene3D - 406 541 IPR023213 -
Seca9g05122 551 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 414 518 - -
Seca9g05122 551 Gene3D - 163 380 IPR023213 -
Seca9g05122 551 Gene3D - 1 162 IPR023213 -
Seca9g05122 551 Pfam Transferase family 413 528 - -
Seca9g05122 551 Pfam Transferase family 6 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05122 Seca-Chr9 152342811 152349532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05122 414 535 Monolignol Biosynthesis Gene Families AT5G48930 37.398 2.51e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05122 K19861 K13610 gmx:100795237 614.379