Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05117 ATGGATAAGTCAGCAATGCCAAAAGCCTTCTCCAATCACCTTGAATGGTACTCATCAAAAGAAGCTGATATGGAGAATGAAGAAAGAATAATCTACACTTACCAGAATGCTTTTCATGGAGTTGCAGCCAAATTGAGTGAAGAAGAAGCAGAGAAGCTGGAGAGTGAAGAAGGTGTTGTGGCTATATTCCCTGAAACAAAGTATGAACTACACACCACAAGAAGTCCCACATTCCTTGGGCTTGAACCAGCACACAGCACTAATATCTGGTCAGAAAATCTAGCTGGCCATGATGTTATAGTGGGAGTAGTGGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAATGATGAAGGCATGAAACCAGTACCTGCTCACTGGAAAGGTGCATGTGAGGTTGGAATAAACTTCACAAAACATCACTGCAATAAAAAGATTGTGGGGGCAAGAATGTTCTTCCAAGGATATGAAGCAGCAATAGGTAAAATTAATGAGCAAAATGATTCTCTATCACCAAGAGATGAAGATGGTCATGGCACTCATACTGCAGCAACAGTTGCTGGCTCTCCAGTGCATGGGGCTAACCTTCTGGGGTATGCTTATGGCACAGCCAGAGGAATGGCACCAGGAGCTAGGCTTGCATCTTACAAAGTCTGTTGGATTGATGGGTGCTTCAGCTCAGATATTGTTTCAGGTATTGATAGAGCTATAGCTGATGGTGTGAATATTCTATCCATCTCTTTGGGTGGTGGAGTCTCCTCTTATTACCATGATAGAAATGCTGGGCCTGACCCTGTCAGCATCACCAATGTGTCACCTTGGGACACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCTGCAGATGTTAAGCTTGGGAATGGCAATAAAGTTACTGGTGTTTCACTCTATAAAGGGGAAATCATGCTATCAAGTGAGAAACAATACCCTTTAGTCTACTTTGGAAGTAACTCAACCAGAATTGATCTAAGATCTGTGTGTTTTGAAGATACTTTGGATCCTCAAGTGGTTTCAGGAAAGATAGTAATTTGTGACAGAGGCAGTGGTTCTAGAGTGGAAAAGGGTCATGTGGTTAAAAGTGCAGGAGGGGTTGGAATGATTCTTACAAATACTGTTGCTAATGGAGAAGAGCTGGTTGCAGATTGTCACCTCCTTCCAGCAGTTGCAATTGGAGAGAAAGAAGGCAAGGAGCTGAAAAATTATGTCTTGACAAATAAAAATGCTACAGCAACTCTAGCTTTTCTAGGTACAAGATTGGGAATCAAACCATCTCCTATAGTAGCAGCATTTTCATCCAGAGGGCCTAATTTTCTCACTTTTGAAATTCTAAAGCCTGATTTAGTGGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGAGGAAAATGGTCCAGCAAGTTTGCCAACAGATGACAGGAGAGTGAAGTTCAATATACTCTCTGGAACCTCAATGTCATGCCCACATGTGAGTGGCATAGCAGCATTGCTTAAAGCTAGGCATCCAGAATGGAGTCCAGCTGCTATAAAATCTGCTTTGATGACAACAGCTTATGTTCATGACAACACCATGAACCCTCTTAGAGATGCCTCAACTACTGAACCTTCAAGTCCTTATGATCATGGTGCTGGACACATTGACCCTATTGGAGCTCTTGACCCAGGTTTAGTCTATGACATTGAGCCACAGGATTACTTTGAATTCCTATGCACACAGAAGATAACTCCAACCCAACTGAGAGTTTTTTCCAAGCATTCAAACAGATCATGTAGACACACTCTTGCCACACCAGGGGACTTGAACTACCCAGCTATATCATTAGTGTTTCCAGAGAAAACATCCACTTCAGTTTTGACTGTCCACAGAACTGTTACCAATGTTGGCCCTCCTGTTTCTAAATACCATGTTATGGTATCACCATTCAAAGGGGCTTATGTCAAAGTTGAGTCAGAAATCTTGAGTTTTACCAGGAAATACCAGAAGCTATCTTACAATATTAGCTTCACTACAAAGTCTAGGCAAACAACACCTGAATTTGGAGATCTGGTATGGAAGGATGGTATACACAGGGTGAGAAGCCCCATTGTGATAACATGGCTGACACCAATATGA 2133 0.4257 MDKSAMPKAFSNHLEWYSSKEADMENEERIIYTYQNAFHGVAAKLSEEEAEKLESEEGVVAIFPETKYELHTTRSPTFLGLEPAHSTNIWSENLAGHDVIVGVVDTGIWPESESFNDEGMKPVPAHWKGACEVGINFTKHHCNKKIVGARMFFQGYEAAIGKINEQNDSLSPRDEDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARLASYKVCWIDGCFSSDIVSGIDRAIADGVNILSISLGGGVSSYYHDRNAGPDPVSITNVSPWDTTVGASTMDRDFPADVKLGNGNKVTGVSLYKGEIMLSSEKQYPLVYFGSNSTRIDLRSVCFEDTLDPQVVSGKIVICDRGSGSRVEKGHVVKSAGGVGMILTNTVANGEELVADCHLLPAVAIGEKEGKELKNYVLTNKNATATLAFLGTRLGIKPSPIVAAFSSRGPNFLTFEILKPDLVAPGVNILAAWSEENGPASLPTDDRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTMNPLRDASTTEPSSPYDHGAGHIDPIGALDPGLVYDIEPQDYFEFLCTQKITPTQLRVFSKHSNRSCRHTLATPGDLNYPAISLVFPEKTSTSVLTVHRTVTNVGPPVSKYHVMVSPFKGAYVKVESEILSFTRKYQKLSYNISFTTKSRQTTPEFGDLVWKDGIHRVRSPIVITWLTPI. 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05117 710 Pfam PA domain 316 406 IPR003137 -
Seca9g05117 710 SUPERFAMILY Subtilisin-like 70 563 IPR036852 GO:0004252|GO:0006508
Seca9g05117 710 Gene3D Peptidase S8/S53 domain 260 572 IPR036852 GO:0004252|GO:0006508
Seca9g05117 710 Pfam Subtilase family 96 530 IPR000209 GO:0006508|GO:0008236
Seca9g05117 710 Pfam Peptidase inhibitor I9 2 71 IPR010259 -
Seca9g05117 710 Gene3D Peptidase S8/S53 domain 98 257 IPR036852 GO:0004252|GO:0006508
Seca9g05117 710 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 703 IPR045051 -
Seca9g05117 710 PRINTS Subtilisin serine protease family (S8) signature 174 187 IPR015500 -
Seca9g05117 710 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Seca9g05117 710 PRINTS Subtilisin serine protease family (S8) signature 488 504 IPR015500 -
Seca9g05117 710 CDD Peptidases_S8_3 68 525 IPR034197 -
Seca9g05117 710 Gene3D - 576 707 - -
Seca9g05117 710 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 71 IPR037045 -
Seca9g05117 710 FunFam subtilisin-like protease SBT1.5 284 427 - -
Seca9g05117 710 ProSitePatterns Serine proteases, subtilase family, serine active site. 489 499 IPR023828 -
Seca9g05117 710 Gene3D - 284 428 - -
Seca9g05117 710 ProSiteProfiles Serine proteases, subtilase domain profile. 67 559 - -
Seca9g05117 710 CDD PA_subtilisin_like 290 420 - -
Seca9g05117 710 ProSiteProfiles KRAB-related domain profile. 33 98 IPR003655 GO:0006355
Seca9g05117 710 Pfam Fibronectin type-III domain 606 704 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05117 Seca-Chr9 152039420 152041639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05117 1 710 Subtilisin-like Serine Gene Family AT5G51750 66.351 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05117 - - gmx:100794709 1164.06