Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05107 ATGTACACTTTGAAGGAGTTGCTTCGTGCAACAAACAACTTTCATCAAGATAATAAGATTGGAGAGGGAGGATTTGGAAGTGTTTATTTTGGTCGAACAAATCAAGGCGTTCAGATTGCAGTAAAGCGCTTGAAGACTATGACTGCAAAGGCAGAGATGGAATTTGCAATTGAAGTTGAAGTACTTGGAAGAGTGAGGCATAAAAATTTGTTGGGATTGAGAGGATTCTATGCAGGGGAAAATGAAAGGTTAATTGTCTATGATTACATGCCTAACCATAGCTTGCTTACTCATTTACATGGTCCACTCTCTAAGGAATGTCACTTAGATTGGTCTAGAAGAATGAGTATAGCAATTGGAGCAGCTGAAGCTCTAGCGTAA 381 0.3911 MYTLKELLRATNNFHQDNKIGEGGFGSVYFGRTNQGVQIAVKRLKTMTAKAEMEFAIEVEVLGRVRHKNLLGLRGFYAGENERLIVYDYMPNHSLLTHLHGPLSKECHLDWSRRMSIAIGAAEALA. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05107 126 Pfam Protein tyrosine and serine/threonine kinase 15 124 IPR001245 GO:0004672|GO:0006468
Seca9g05107 126 PANTHER OS01G0253100 PROTEIN 2 126 - -
Seca9g05107 126 ProSitePatterns Protein kinases ATP-binding region signature. 20 42 IPR017441 GO:0005524
Seca9g05107 126 FunFam PTI1-like tyrosine-protein kinase At3g15890 1 89 - -
Seca9g05107 126 SUPERFAMILY Protein kinase-like (PK-like) 4 126 IPR011009 -
Seca9g05107 126 ProSiteProfiles Protein kinase domain profile. 14 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05107 126 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05107 Seca-Chr9 151794943 151795412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05107 2 126 Receptor kinase-like Gene Family AT1G60800 48.413 1.94e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Seca9g05107 PK_Tyr_Ser-Thr 5.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05107 - - lja:Lj0g3v0095039.1 243.817