Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05022 ATGTCCTTACTTTTCTGTATACTGATTCACATCAATTTTTCCTATTCCCCTTTTAATCGAGCACCACAAGAACTGACTGGGACTGTTGTTAAGCCAGAAAAGACTAATCACACCTTCTCTCTTCAATCTGAAATACCAATCGACAAAGCTTGCTCCTTTCTTACATCTGCAGACATAATTAAGTTTCTCACAGGAGATTTCGGATTAAGTAAAGCTAGATCCAGTGATCTCTTCTGGGAAGCTGTTTGGCCTCGTCTCTTGGCAAAAGGGTGGCACTCTGAACAGCCTAAGGATCATGTTGTTTCTGGTTCAAAAGGATCTTTAGTTTTTCTTATACCTGGTATTAAGAAATTTTCAAGCAGACTGATAAAAGGTAACCACTACTTTGATTCTATAAGTGATATATTGAATAAAGTAGCATCTGACTCGCAGCTTCTTGAGATGAAAATTCAAGCAACTGAGGGCAATGTGGATAGAGAAAATGGACAGGATAAGAAAAAATTAGATGTTTTGTCAGATAAGCAACAAATTTGCAACCTTCAACCTCTTAGTTTCAAGTGTCAAGATCTAATGAAATCGACCTTATTGCTTGTTCTAATTCATCAGGTGAAGGGAGAACCCAATATTTCTTACATCTGTTCAAGATACTATCGAGCCCCTGAACTTATATTTGGTGCCACTGAATATACTACTGCCATAGATATATGGTCAACTGGTTGTGTGATGGTTGAGTTGCTTCTTGGACAGGTAACTTTTTTTCTTTTTGTTTTCTTATGCTTGTAA 783 0.3716 MSLLFCILIHINFSYSPFNRAPQELTGTVVKPEKTNHTFSLQSEIPIDKACSFLTSADIIKFLTGDFGLSKARSSDLFWEAVWPRLLAKGWHSEQPKDHVVSGSKGSLVFLIPGIKKFSSRLIKGNHYFDSISDILNKVASDSQLLEMKIQATEGNVDRENGQDKKKLDVLSDKQQICNLQPLSFKCQDLMKSTLLLVLIHQVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSTGCVMVELLLGQVTFFLFVFLCL. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05022 260 Pfam Protein kinase domain 208 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05022 260 PANTHER ATROPHIN-RELATED 19 194 - -
Seca9g05022 260 SUPERFAMILY Protein kinase-like (PK-like) 204 252 IPR011009 -
Seca9g05022 260 ProSiteProfiles Protein kinase domain profile. 1 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g05022 260 Gene3D Transferase(Phosphotransferase) domain 1 205 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05022 Seca-Chr9 147446284 147447256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05022 211 252 MAP Kinase Gene Family AT2G46070 54.762 3.23e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Seca9g05022 Pkinase 5.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05022 - - gmx:102661068 241.506