Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g05019 ATGTTTTTGCTGCTTTTGTATAGGTATGAGCTTGGTCACCAGTCGAAAAACACTAAGTTATCAAGCAACAAGACAGTTGGGAGGATTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCATTGAGATTGGATACTGGAAATTACTCATGGGGTAGTGAAGCAGTAACTCACAAGACTCGTATTCTAGATGTAGTTTACAATGCCTCAAACATTGAGCTTGTGCGAACTCAAACCATGGTCAAGAGTGTTATTGTCCAGGTTGATGCCGCTCCATTCAAATAG 282 0.4184 MFLLLLYRYELGHQSKNTKLSSNKTVGRIRVRGGNVKWRALRLDTGNYSWGSEAVTHKTRILDVVYNASNIELVRTQTMVKSVIVQVDAAPFK. 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g05019 93 CDD Ribosomal_S8e_like 8 93 - -
Seca9g05019 93 PANTHER 40S RIBOSOMAL PROTEIN S8 8 93 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca9g05019 93 NCBIfam ribosomal protein eS8 8 90 IPR001047 GO:0003735|GO:0005840|GO:0006412
Seca9g05019 93 Gene3D - 15 93 - -
Seca9g05019 93 Pfam Ribosomal protein S8e 9 91 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g05019 Seca-Chr9 147157904 147158185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g05019 8 93 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 87.209 1.22e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g05019 K02995 - cave:132175009 158.688