Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04997 ATGTCACATTCTCGGGTGGCAGGAGGGTTAACCCAATCATCATCAAGTTCTGGAATTTTTTTTCAAGGAGACGGGCAGTCACAGAATGTAGTTAACTCTCACTTAAGCTCCTCTTTTGTTAACTCATCTAACACAGTTCCTGGAACCAGTCGTTCTAACCTTGGTCCGGTTTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTGGCAAACTCAGCACCAAGTGTGGGAGCCAGTTCTTTAGTCACAGATGCAAATTCTGCACTCTCTGGTGGCCCCCATTTGCAGAGAAGTGCAAGCTTTAACACAGACCCATACTTACGTTTACCTGCCTCACCCATGTCATTTACATCGAATAATATCAGTATTTCTGGATCATCAGTGATGGATGGTTCCTCTGTAGTACAGCAAAGTTCTCATCAAGATCAGAATGCTCAACAATTGCAGCAGAATCAGCAGCAGCAGCAGGGTGCTTCAAGTGTTGCGTCTTTGCCTGTATCTCAAACTGGCCCATCTCCACTCCAAATGGGTGCACATGTAGCAGGATCTTTCATTCAAGATCCAAATATCCACCTGGCTAAGAAACCTAGGCTGGATATCAAGCAGGATGATATAATGCAACAGCAGGTAATACAACAGCTTCTTCAGAGACAAGACCCCATGCAATTCCAAGGTCGTAATCCACAGCTACAGGCTTTGCTTCAGCAGCAGCAGAGGCTGAGGCAACAACAAATATTTCAGTCATTGCCACAGTTACAGCGAGTGCACTTGCAACAACAACAAATGCAATTGAGGCAGCAATTACAGCAACAAATGATGCAGCAGCCCTTATCTTCTATGAAGCGTCCACATGATAGTGTTGTTGGTGGGGTATGTTCCCGCCGATTAATGCAGTACCTCTATCATCAAAGGCATCGACCACCTGATAGTGGCATTAGCTATTGGAGAAAATTTGTGGCCGAATATTACTCTCCTCGTGCAAAGCAACGGTGGTGCTTGTCATTATATAGTAATGTTGGGCAACATGCACTTGGTGTTTTCCCCCAAGTGGCTATGGGTGCATGGCAGTGTGACATATGTGGTTCTAAATCTGGAAAGGGATTTGAGGCGACTTTTGATGTACTGCCTAGACTTAATGAAATCAAATTTGGCAGTGGATTGATCGATGAACTTTTGTTTTTGGACATGCCACGTGAAATAAGATCTCCTTCTGGTGCAATGATGTTAGAATATACAAAAGCTGTTCAAGAGTGTGTGTATGAGCAGCTTCGTGTTGTTCGTGAGGGTCAACTTCGTATCATATTCACTCAAGACCTGAAGATATTTTCTTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAAGTTGGTTGCACCACAGGTCAACCAATTGGTTCAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGTCAGATGGGGTTTCTCAGCAAGACTTGCAAACAAACAGCAACATGGTTTTGACAGCTGGCCGTCAGCTTGCAAAGAGTTTGGAGCTACAATCACTAAATGACTTGGGCTTTTCAAAAAGATATGTGAGGTGTTTGCAGATTTCTGAAGTTTGCAATAGCATGAAAGATCTCATAGATACCTGTTATGATCGCAAAATTGGAGCAATTGAGAGCTTGAAAGAATTTCCTCGAGTCACGACTGAAGCAAAGCTCCAGATGCAAAAGATGCCAGAGATGGAACAGCTAGCAAATGTTCAAGGTCTGCCCACTGATCGTAACACGCTTAATAAGCTGATGGCAATGAACAACCATATAAACAACAATCACAACAATATGGTTAATCGTGGTGGTTCTTTGGGTGGGTCAGCACAAGCTGCTATGGCACTGACCAACTACCAGAGTCTTGTGAGGCAAAACTCAACGAATTCAAGCCCTGGCTCACTTCAGCGAGAAAGACCCTCTTTCAGTAACTCGAACCAGAGTCCCTCTTCCGCTGTGCAAGGTGCTGGTACTGCTTTAATTCCAGGTTCAATGCAGAATTCACCTGTTAGTGGTTTCCCAAGTCCACATTTACCCCCACAGCAGCAGCAGCAACAGCAACAACATCTTCAACCACACTCATTAAGTGCAAATAGTTTACTGCAACAGAATCATTCACAATCCCAAGGAAATCAAGCTCTGGATCAGCAGATGATCCAGCAAATACTGCAGCAGATGTCAAGTAACAATGGGGGAGTGCAACCACAGTCTCTTGGTGGACCCAATGCAAATGGGAATATGGCAAAGAGTGGGTTGGGTTTTGGGTGCCAAACTCCAGCCATAAGTGGAGGCTCTGCCAATGTTCCTGGGAATAATGGACCTGTTTCAAGGAGTAATAGCTTCAAGGCGGCTTCAAACAGTGATTCTTCTGCAGCTGGAGGCAACAATGGATTCAACCAGAGAACATCTGATATGTCACAAAATCTCCATTTGCAAGATGTGGTTCATAATATTGCTCCTGAGTTAACGGATAATCACTTCTTTAACAGTGATCTAGATGATAACATGGGTTTTGACTGGAAGGCATGA 2553 0.4422 MSHSRVAGGLTQSSSSSGIFFQGDGQSQNVVNSHLSSSFVNSSNTVPGTSRSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASFNTDPYLRLPASPMSFTSNNISISGSSVMDGSSVVQQSSHQDQNAQQLQQNQQQQQGASSVASLPVSQTGPSPLQMGAHVAGSFIQDPNIHLAKKPRLDIKQDDIMQQQVIQQLLQRQDPMQFQGRNPQLQALLQQQQRLRQQQIFQSLPQLQRVHLQQQQMQLRQQLQQQMMQQPLSSMKRPHDSVVGGVCSRRLMQYLYHQRHRPPDSGISYWRKFVAEYYSPRAKQRWCLSLYSNVGQHALGVFPQVAMGAWQCDICGSKSGKGFEATFDVLPRLNEIKFGSGLIDELLFLDMPREIRSPSGAMMLEYTKAVQECVYEQLRVVREGQLRIIFTQDLKIFSWEFCARRHEELLPRKLVAPQVNQLVQVAQKCQSTIAESGSDGVSQQDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRYVRCLQISEVCNSMKDLIDTCYDRKIGAIESLKEFPRVTTEAKLQMQKMPEMEQLANVQGLPTDRNTLNKLMAMNNHINNNHNNMVNRGGSLGGSAQAAMALTNYQSLVRQNSTNSSPGSLQRERPSFSNSNQSPSSAVQGAGTALIPGSMQNSPVSGFPSPHLPPQQQQQQQQHLQPHSLSANSLLQQNHSQSQGNQALDQQMIQQILQQMSSNNGGVQPQSLGGPNANGNMAKSGLGFGCQTPAISGGSANVPGNNGPVSRSNSFKAASNSDSSAAGGNNGFNQRTSDMSQNLHLQDVVHNIAPELTDNHFFNSDLDDNMGFDWKA. 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04997 850 MobiDBLite consensus disorder prediction 1 21 - -
Seca9g04997 850 MobiDBLite consensus disorder prediction 127 177 - -
Seca9g04997 850 MobiDBLite consensus disorder prediction 736 759 - -
Seca9g04997 850 PANTHER LIM DOMAIN-BINDING PROTEIN 41 835 IPR029005 -
Seca9g04997 850 MobiDBLite consensus disorder prediction 38 59 - -
Seca9g04997 850 Pfam LIM-domain binding protein 295 555 IPR029005 -
Seca9g04997 850 MobiDBLite consensus disorder prediction 127 174 - -
Seca9g04997 850 MobiDBLite consensus disorder prediction 736 752 - -
Seca9g04997 850 MobiDBLite consensus disorder prediction 633 701 - -
Seca9g04997 850 MobiDBLite consensus disorder prediction 773 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04997 Seca-Chr9 145348554 145353936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04997 290 561 C2H2 Transcription Factor Family AT1G43850 58.456 5.16e-106 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04997 - - gmx:100816886 1112.06