Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04978 ATGAACGTTTGTCCTCCTGCCTGGGATTGGTTCCCCACGGAATACCATCCTCAATCGGTTACCGGCCGCATTCCAAATCTCTTTCTGGAAGAATATGGAGCGACCCTTCAACCGATTGTGCGGTTCCTGGACCCTAGTGGCAACCTCGTGGACATATCTTTTGAGAGAAGTCGTCATTCCACCTCCTTCACTGACGGCTGGAAGGATCTGAAGACAATCTACCCCATCCGCAGCGGCGCATGGTTATTCCTTCATTTCGCATCCCCTACCCTCATCAACATCGTAATTCTGGACCGTAACCTGGCTGAGATCAACTATCCCACCCCACCAGCCAGATTCTTAAATATCCACACAGCTTTACAAGACCTCTTCGATAACCACACCACTGGACTACCGCATCATTACCCCCAGTTTGACCCACAAATGACGAAGTGCATCATCTCTCAGAAGAAAAAAATTTCATATGCCCAGGCCAGAGGCCGCGCCATGGTTGTCACTTCTCACCTTCACCAATTAATCGTTTTTGACACCGTTAGTTTCCTTAAATTAGGTTACTAA 558 0.4839 MNVCPPAWDWFPTEYHPQSVTGRIPNLFLEEYGATLQPIVRFLDPSGNLVDISFERSRHSTSFTDGWKDLKTIYPIRSGAWLFLHFASPTLINIVILDRNLAEINYPTPPARFLNIHTALQDLFDNHTTGLPHHYPQFDPQMTKCIISQKKKISYAQARGRAMVVTSHLHQLIVFDTVSFLKLGY. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04978 185 SUPERFAMILY DNA-binding pseudobarrel domain 22 100 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04978 Seca-Chr9 144611123 144612390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04978 23 107 B3 DNA Binding Superfamily AT4G01580 25.882 2.50e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04978 - K12395 mtr:25480725 62.3882