Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04974 ATGCGTTTTGATACCGTGGAAGAAGCAAAGAGACTTTATCAAGAATATGCAATTAGAAAAGGATTTGCTATCGTAACGAGAAATTCTCGGAAAGGAGGTGATGGTAAAGCAATATACAATGTATTTTCTTGTTTAAGACAGGGGATTTTTGTGTCATCCACACCGGCTGATGTGACGTCGAGGCCATCAACTAAATTGAATTGTACAGCACACATAAATTTCACTCTTCGGAAAGATGGGTTTTGGTACATACAAAAATGTGTTCATGAACATTCTCAAGACACGTGTCTCTTTTAG 297 0.3771 MRFDTVEEAKRLYQEYAIRKGFAIVTRNSRKGGDGKAIYNVFSCLRQGIFVSSTPADVTSRPSTKLNCTAHINFTLRKDGFWYIQKCVHEHSQDTCLF. 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04974 98 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 92 - -
Seca9g04974 98 Pfam FAR1 DNA-binding domain 12 92 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04974 Seca-Chr9 144561722 144562018 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04974 FAR1 6.5e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04974 - K17604 psat:127130074 86.2705