Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04970 ATGGATGGTTGTTCTACATTTTGGACTGATGAAAATTCTGAGAGCAACCGAGATGAGTCACCTAATGAGGATGGAAACCCGGTGGGAGACCAAGCTGGGCTGTCATGGGGCGGTAGGATGATACATGAACTAACACATGATGATATTAGATGTCTGGAGTTCGGTTCTGAGGGTGAGGCATATAGTTTTTATTCGGATTATGCCAAACAACGAGGGTTTGCTGTGAGGAAAGATGATATTGAGCGAAATGAGAAAGGTGATATTGTTAAGCGATATTTAGTGTGTAATAAGGAGGGAACAAGGGAGAAGAAACACTTGGAGAGAAAGGATAGAGTGAGGGAGGCCAGGCCAATTACTCGTGTGCAGTGCACAGCAAGGATGCGTGTTTACTTAGATATGAGGAGTGGGAAATGGAAGGTGTCTGCATTCCACGACGATCACAACCATGAGTTAACTCCTCCAACGTATGTTCACATGATGCCAGCTTATAGACGATTGAGTGAATCTGATAAAGCTCAAGTTGATACCTTGCATGCAGTCGGTGTGAGAACTTGCCATATTATGAGTTTTATGATTGGGCAGAAAGGGGGACATGGTGAATTAGGTTTCTGTAAAAAGGACATGTATAACCACATTGATAAACAGAAGAGGGCTAATATAGAGGATGGGGAAGCTGAAGACGATGAATCTTCCTGGGAGAGTGATGGTGCCATGGGAAATGATAAAGGAGAAGTGATGATGGATGTGTTTGATATACAGAGTGGATTAAGTTGGGGTGATGATTTAACTCTCAGTCAAAGAGGATCGGCTGGTACAAGCAAAGGGAAGAGGCGGTGTGTGTATCAACCATCCCAAACATCCTTCGATCGAGCTGAATTGCGGGGACTACATGACAAGGTTGGTGAAAGACAAGCCAAGCAAAGTAGGCGTTCAAATGGCAAGCAGAAAAATAAAGGAGTAGACGGAGCAGGAGAGGAGATGAAGTTTGGACCTGGGAAGATGGGTCCAGGAGCGGGCGTTAACAAAGTTAATATGCTCCCTACTTCCCTTTTTCCTCATTTCCCATCAACGAGCATATATCCCCCCCATGTCTGCGGCCTCCACCCTATGGTCCCTTTTATGGATACGGCTCATACGGTTATTATGGACAGTGTAACGCCCTAA 1164 0.4502 MDGCSTFWTDENSESNRDESPNEDGNPVGDQAGLSWGGRMIHELTHDDIRCLEFGSEGEAYSFYSDYAKQRGFAVRKDDIERNEKGDIVKRYLVCNKEGTREKKHLERKDRVREARPITRVQCTARMRVYLDMRSGKWKVSAFHDDHNHELTPPTYVHMMPAYRRLSESDKAQVDTLHAVGVRTCHIMSFMIGQKGGHGELGFCKKDMYNHIDKQKRANIEDGEAEDDESSWESDGAMGNDKGEVMMDVFDIQSGLSWGDDLTLSQRGSAGTSKGKRRCVYQPSQTSFDRAELRGLHDKVGERQAKQSRRSNGKQKNKGVDGAGEEMKFGPGKMGPGAGVNKVNMLPTSLFPHFPSTSIYPPHVCGLHPMVPFMDTAHTVIMDSVTP. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04970 387 MobiDBLite consensus disorder prediction 261 289 - -
Seca9g04970 387 Pfam FAR1 DNA-binding domain 62 152 IPR004330 -
Seca9g04970 387 MobiDBLite consensus disorder prediction 291 323 - -
Seca9g04970 387 MobiDBLite consensus disorder prediction 1 34 - -
Seca9g04970 387 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 226 - -
Seca9g04970 387 MobiDBLite consensus disorder prediction 261 335 - -
Seca9g04970 387 MobiDBLite consensus disorder prediction 215 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04970 Seca-Chr9 144450405 144453263 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04970 FAR1 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04970 - - ccaj:109792835 226.098