LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g04947	ATGGAAGATGATATAGATCCTATATTTGATTCTTGGTGTGATGCTAGTGTTAGTGTTAGTGTGGAGGATAGTGAAGTGTCTGAGAAGAATGAAAAAGTAGACATTGATGTAGGAGAAGGTCAGTTTAGAAAGATTTTTGACTTAACTACTGATGAATTTCGGTCCCTTGAGTTTCATAGTGAAGAAGAAGCATATCATTATTATGAGTTATATGGAAAATATAACGTGTTTGTGGTTAGAAAAGATGATGTAACCAGGCATATTAGGGGGAATATTATTATGCGTCAATTTGTTTGCAATAGGGAGGGATTAAGGAGCAAGAAGCACTTTATGAGGGTGGATAGGAAGAGAGAGCATAGGCCACTCACCCGGACAAACTGCCAAGCTAAGTTGCGTGTACACTTTGATTACAAGATTTTAAAATGGAAAGTTGTCTCATTTGAAGAGTGTCATAACCATGAACTTACCCATCCAAAATATGTTCACTTGCATTCTGCTTATCGTAGTATGACAGATGGGGATAAGGCCCAGGTTGACATTTTGCATGCATATGGTGTTAGAAGTTGTCATATCATGAGGTACCTTGTGGCTCAGAAGGGTGGGTATGGTCGTGTTGGTTTTTCAAAAAAGGACATGTACAACTATCTTGACCGTAAAAATCAAGCAAAGATTAAGAAAGGGGATGTACGTGCTGGTTTGAGTTATCTATAA	711	0.3797	MEDDIDPIFDSWCDASVSVSVEDSEVSEKNEKVDIDVGEGQFRKIFDLTTDEFRSLEFHSEEEAYHYYELYGKYNVFVVRKDDVTRHIRGNIIMRQFVCNREGLRSKKHFMRVDRKREHRPLTRTNCQAKLRVHFDYKILKWKVVSFEECHNHELTHPKYVHLHSAYRSMTDGDKAQVDILHAYGVRSCHIMRYLVAQKGGYGRVGFSKKDMYNYLDRKNQAKIKKGDVRAGLSYL.	237

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g04947	236	Pfam	FAR1 DNA-binding domain	67	156	IPR004330	-
	Seca9g04947	236	PANTHER	OS01G0519700 PROTEIN	55	236	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g04947	Seca-Chr9	143847023	143847733	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca9g04947		FAR1	2.9e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g04947	-		-	ccaj:109792835	271.937