Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04936 ATGATTCTTAGGCAGGAAAATGACAAGCTCAGAGCTGAGAACAGTGTGATGAAGGAAGCTTTAGCAAATCCAATGTGTAACACCTGTGGTGGACCATCAATTCCTGGCCAAATTTCATTGGAGGAGCACCAAATTAGAATTGAAAATGCTCGATTAAAGGATGAACTGAATAGGATTTGTGCCTTGGCAAATAGGTTCTTGGGTAGGCCACTTTCATCCTTGGCCAGTACATGCCTCTGCCAACCCCAAATTCTGGTCTTGTACTTGGGACTTGATGTTGGAGATGGTGTTATGGGCACTCCACCACCTACACTACCTGGGATAAGATCATCAATGTGGTTGATTGGAAATGAAGTCCAGCTTGATAGATCTATGCTTATAGATGTTGCAGTAGCTGCTATGGATGAATTGCTTAAGATGACTCAACCAGATAGCCCTCTTTGGATTAGGAGTTCAGATGGAAGCAGGGAAGTGCTGAACCATGAGGAGTATTCAAGGGTGTGTTCTTATATCAGGCCAAAACCCATTGGTTATGTAACTGAAGCTACAAGAGAAACTGGGTTAGTCATAATCAACAGTTTGGCCCTTGTGGACCTATTGATGGATGCAGGATCGATGGTCGAGATGTTTCCATCTATGATTGCTAGAGCTGTCACTTTGGATGTAATTTCTAATGGAATGGGTGGAACCAGAAAGGGAGCTTTGCAAGTGATGCATGCTAAGGTTCAATTGCCTTCTCCACTAGTCCCTGTTCGTCAATTGAGTTTCCTCAGGTTTTGCATGCAGCATGCAGAAGGTGTGTGGGCTGTGGTTGATGTTTCAGTTGACATTGGTCATAATGCTACCAATGGAATCCAATTTATGAACTGTAGGAGGCTTCCTTCTGGATGTGTTGTTCAGGATATGCCCAATGGTTTCTCCAAGATTACTTGGGTTGATCACTCCCAGTATGATGAGAGTGTTGTCCACCAACTCTATAACCCATTGGTTAATTCTGGAATTGGATTTGGTGCTCATAGATGGATTGCAACTCTCCAAAGGCAGTGTGAATGCTTTGCAATCCTCATGTCCCCTTCCATACAACCTGAGGACCCCATAGGTATGTCACATTGTTACTACCTCTAA 1125 0.4364 MILRQENDKLRAENSVMKEALANPMCNTCGGPSIPGQISLEEHQIRIENARLKDELNRICALANRFLGRPLSSLASTCLCQPQILVLYLGLDVGDGVMGTPPPTLPGIRSSMWLIGNEVQLDRSMLIDVAVAAMDELLKMTQPDSPLWIRSSDGSREVLNHEEYSRVCSYIRPKPIGYVTEATRETGLVIINSLALVDLLMDAGSMVEMFPSMIARAVTLDVISNGMGGTRKGALQVMHAKVQLPSPLVPVRQLSFLRFCMQHAEGVWAVVDVSVDIGHNATNGIQFMNCRRLPSGCVVQDMPNGFSKITWVDHSQYDESVVHQLYNPLVNSGIGFGAHRWIATLQRQCECFAILMSPSIQPEDPIGMSHCYYL. 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04936 374 SMART START_1 128 351 IPR002913 GO:0008289
Seca9g04936 374 SUPERFAMILY Bet v1-like 121 352 - -
Seca9g04936 374 Coils Coil 3 23 - -
Seca9g04936 374 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 364 IPR042160 -
Seca9g04936 374 Pfam START domain 129 351 IPR002913 GO:0008289
Seca9g04936 374 CDD START_ArGLABRA2_like 123 350 - -
Seca9g04936 374 ProSiteProfiles START domain profile. 119 354 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04936 Seca-Chr9 143297844 143299715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04936 2 364 Homeobox Transcription Factor Family AT4G00730 53.388 7.55e-134 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04936 K09338 - gmx:100794400 536.954