Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04881 ATGTCATTGGCCAGAAAAGGAACCTCCCAAAGCCACAATTCCTCTGCATGTGCTTACACTCAGAATCAACCTTTAATGATTCCTAATATAAACTCTCAAGCGCCTTCCAAACCAATTGCTAGTGGCCTACCAATTGCTAGGAAAACTTCACTTCATCAGTTCCTGGAGAAGAGGAAAGATAGGTATGCCTCTCAAACAATTTAA 204 0.4118 MSLARKGTSQSHNSSACAYTQNQPLMIPNINSQAPSKPIASGLPIARKTSLHQFLEKRKDRYASQTI. 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04881 67 Pfam Jas motif 44 64 IPR018467 -
Seca9g04881 67 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04881 Seca-Chr9 140572922 140573674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04881 1 61 Tify Gene Family AT1G74950 39.241 5.34e-08 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca9g04881 Jas_motif 2.6e-10 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04881 K13464 - gmx:100527510 86.6557