Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04880 ATGAACTTTCGTGCTTTCTCTCTAAGATTTTCTGAATCTGTATACTTTACAGGGTTTCCAGAGACATCTTGTCAATCTACAACAACCATGGAGTTGTTCCCTACCAGGGTGACACCACAAAACCTCATAGCCATGGATTTTCTATCTTCACCCGCCGTTTATCCTCGACACACTGAGGTTCCAACCTTGGTAAACTCAAGTGCATTTAAGTTTGTGGGCAAAGAGCCTACAACTTCACAATTGACAATCTTTTATGGTGGGCAAGTTGTTGTATTTGATGATTTTCCCTTTGACAAAGTGGAGGAGATAATGTCATTGGCCAGAAAAGGAACCTCCCAAAGCCACAACTCCTCTGCATATGCTTACACTCACTATCAGCCTTCAATGATTCCTAATATCAACTCTCAAGCTCCTTCCAGACCAATTGCTAGTGGTCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCCTGGATAAGAGGAAAGATAGGTAG 495 0.4222 MNFRAFSLRFSESVYFTGFPETSCQSTTTMELFPTRVTPQNLIAMDFLSSPAVYPRHTEVPTLVNSSAFKFVGKEPTTSQLTIFYGGQVVVFDDFPFDKVEEIMSLARKGTSQSHNSSAYAYTHYQPSMIPNINSQAPSRPIASGLPIARKASLHRFLDKRKDR. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04880 164 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 23 164 IPR040390 -
Seca9g04880 164 SMART tify_2 74 109 IPR010399 -
Seca9g04880 164 Pfam Jas motif 147 164 IPR018467 -
Seca9g04880 164 ProSiteProfiles Tify domain profile. 74 109 IPR010399 -
Seca9g04880 164 Pfam tify domain 75 107 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04880 Seca-Chr9 140558045 140558781 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04880 3 164 Tify Gene Family AT1G19180 37.500 4.01e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Seca9g04880 tify 5.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04880 K13464 - gmx:100802800 193.741