Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04878 ATGGACTTTCATGCTCTCTCTCTAAGATTTTCTGAATCTGTATATTTCACAGGGTCTCCCGAGACATCTTGTCACTCTACAACAACCATGGAGTTGTTCCCTACCAAGGTGACACCACAAAACCTCACAGCCATGGATTTGCTCTCTCCACCCGCCGTTTATCCTCTACACACTGAGGTTTCAACTTTGGTTAACTCAAGTGCATTTAAGTCTGTGGGCAAGGAGCCTAAAGCTTCACAGTTGACAATCTTTTATGGTGGGCAAGTTGTTGTATTTGATGATTTTCCTGCTGACAAAGTGGAGGAGATAATGTCATTGGCCAGAAAAGGAACCTCCCAAAGCCACAAGTCCTCTGCATATCCTTACACTCAGAATCAGCCTTCAATGATGATTCCTAATATCAACTCTCAAGCTCCTTCCAGACCAATTGCTAGTGGCTTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCCTGGAGAAGAGGAAAGATAGAATTGCTGCCAAAGCACCATATCAAACAAACAATCCTGTCTCTGCCCCTAACAAGCCGACTGAATCCATTTCATGGCTCGGGCTAGGTGCAAAATGA 591 0.4433 MDFHALSLRFSESVYFTGSPETSCHSTTTMELFPTKVTPQNLTAMDLLSPPAVYPLHTEVSTLVNSSAFKSVGKEPKASQLTIFYGGQVVVFDDFPADKVEEIMSLARKGTSQSHKSSAYPYTQNQPSMMIPNINSQAPSRPIASGLPIARKASLHRFLEKRKDRIAAKAPYQTNNPVSAPNKPTESISWLGLGAK. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04878 196 ProSiteProfiles Tify domain profile. 74 109 IPR010399 -
Seca9g04878 196 MobiDBLite consensus disorder prediction 166 196 - -
Seca9g04878 196 MobiDBLite consensus disorder prediction 172 186 - -
Seca9g04878 196 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 26 184 IPR040390 -
Seca9g04878 196 Pfam Jas motif 148 173 IPR018467 -
Seca9g04878 196 SMART tify_2 74 109 IPR010399 -
Seca9g04878 196 Pfam tify domain 75 107 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04878 Seca-Chr9 140539354 140541575 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04878 3 196 Tify Gene Family AT1G19180 36.916 4.51e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Seca9g04878 tify 4.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04878 K13464 - gmx:100802800 252.677