Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04863 ATGGTTAACATAGGTGAGGAGCCATGTATTAATTTAGATGATGACAGAGATGATAATGATAGTTATGGTGTTAGCATTGATGAAAGTGTTCATGGAGAGGACAGTGGTGTAGGGGGTCAAAATGAGCAGGGAGAATTGGTTTCACCAGATGAAAAAGTTAGACAGCTATTAGACCTTACAGGTGATGATATACGAATGCTTGAATTTGGTAGTGAACATGAGGCATGTATATTTTATGAGACATATGCTAAGTCTATTGGGTTTTCTGTGAGGAAAGATGATGTAACTAGAGATTCAAAGGGTCAGGTGGTAATGCGACAAATCGTATGCAACAGAGAGGGTTTGAGGAATAAAAAGCACTTCAGGAGGGTTGACAGAAAAAGACCCCATAAACCAATAACTCGCACAAAGTGTCCAGCTAAGTTGAGGGTGCATTATGATTTCAAGAATTCAAAATGGAAAGTGGTTTCTTTTGTGGAGACCCATAATCACTATCTAACCCCAGCAATGTATAGGCACCTAATGCCTACATACCGTGTTATTTCTGATGCGGACAAAGCTCAGGTGGATAGCTTGCACTCAAGTGGGGTTAAGACATGTCATATAATGGGATATATGCTGTCACAAAAAGGGGGATATGGTAAACTTGGTTTTGGTAAGAAGGATTTGTATAATTATATAGATCGCATAAAGCGCCTTAAGATTAAGAGTGGAGATGCACGGGCTGCATTGAGCTATCTACAAGGCAAGGCAGATAATGACCCAGTGCTATATTCGAGTTTTGAAACTACTGATGATGGTAAATTAAAGCACCTATTTTGGGCAGATGGATGCAGCATAGCTGATTATATGTGCTTTGGTGATGTTGTTGCATTTGACGCCACCTACAAGAAGAACAAGTACAACAAACCCCTAGTTATATTCTCTGGTTGTAATCACCATTCCCAAACAGTTATATTTGGGTGTGCTTTGGTGTCTGATGAGACAACTGAGACATATAAATGGGTCTTAGGAGCTTTTCTGGATGCAATGCAAAATAGACCACCTAAAGCAGTGGTAACAGATGGAGATGCTGCTATGAGAGAGGCTATAAAGACTGTGTTTCCGGACGCTTCACATCGCCTTTGTGCATGGCATTTGCACAAGAATGCATGTGATAATGTGAAGAATTCTCCTTTTCTAGAAGATTTCAAGAAAGCAATGTACTCTAACTTTACCGCAGATGAGTTTGAAGAATTTTGGCACAAAATGGTGGTGAAACATGGTCTTCAGGGGAATAAATGGGTTTCCAAATCTTACCAAAATAAGGCATTGTGA 1317 0.3986 MVNIGEEPCINLDDDRDDNDSYGVSIDESVHGEDSGVGGQNEQGELVSPDEKVRQLLDLTGDDIRMLEFGSEHEACIFYETYAKSIGFSVRKDDVTRDSKGQVVMRQIVCNREGLRNKKHFRRVDRKRPHKPITRTKCPAKLRVHYDFKNSKWKVVSFVETHNHYLTPAMYRHLMPTYRVISDADKAQVDSLHSSGVKTCHIMGYMLSQKGGYGKLGFGKKDLYNYIDRIKRLKIKSGDARAALSYLQGKADNDPVLYSSFETTDDGKLKHLFWADGCSIADYMCFGDVVAFDATYKKNKYNKPLVIFSGCNHHSQTVIFGCALVSDETTETYKWVLGAFLDAMQNRPPKAVVTDGDAAMREAIKTVFPDASHRLCAWHLHKNACDNVKNSPFLEDFKKAMYSNFTADEFEEFWHKMVVKHGLQGNKWVSKSYQNKAL. 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04863 438 Pfam MULE transposase domain 289 383 IPR018289 -
Seca9g04863 438 Pfam FAR1 DNA-binding domain 78 167 IPR004330 -
Seca9g04863 438 PANTHER OS01G0519700 PROTEIN 67 435 - -
Seca9g04863 438 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04863 Seca-Chr9 140223535 140224851 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g04863 MULE 5.1e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04863 - - ccaj:109792835 577.4