Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04848 ATGGCACATCTCGGAGGCGCCGCAGAAACAGGTTTGGGAGATGATGATCTGTTTACACAACTATGGAAGTTGTGTGCAGGGCCTTTGGTGGATGTTCCTCGTGATGGAGAGCGAGTTTTCTACTTCCCTCAGGGTCACATGGAACAACTTCAAGCCTCAACAAATCAGGAACTGAGCCAGCAAATTCCTCATTTCAATCTCCCCTCTAAGATTCTCTGCCGTGTTGTGCACATTCAGTTGTTGGCGGAACAAGAAACTGATGAAGTTTATGCTCGTATCACCTTGGTTCCAGAATCAAATCAAAATGAGCCGACAAGTCCCGACCCTAGTCTACCCGAGACCCAGAAACAAAAGTTTCACCATTTTAGCAAGATATTAACTGCCTCTGATACTAGCACACATGGAGGATTTTCAGTTCTGCGGAGGCATGCTACCGAGTGCTTACCTGAATTGGACATGACCCAAACATCCCCAACCCAGGAACTAGCAGCCAAGGATCTTCATGGGTTTGAGTGGAAGTTTAAGCATATATTCAGAGGTAATTTGGTTTGGATTTCTGTTTTAGTTGCATATTCCAATTTCCAAGTTTGTATGAATGAATATCATGAGTAG 612 0.4444 MAHLGGAAETGLGDDDLFTQLWKLCAGPLVDVPRDGERVFYFPQGHMEQLQASTNQELSQQIPHFNLPSKILCRVVHIQLLAEQETDEVYARITLVPESNQNEPTSPDPSLPETQKQKFHHFSKILTASDTSTHGGFSVLRRHATECLPELDMTQTSPTQELAAKDLHGFEWKFKHIFRGNLVWISVLVAYSNFQVCMNEYHE. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04848 203 Gene3D - 119 196 IPR015300 -
Seca9g04848 203 SUPERFAMILY DNA-binding pseudobarrel domain 109 181 IPR015300 -
Seca9g04848 203 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 180 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04848 Seca-Chr9 139750077 139751943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04848 11 180 B3 DNA Binding Superfamily AT2G46530 73.099 4.52e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04848 K14486 - gmx:100820503 321.242