Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04835 ATGGAAACCCCATTGACACTCACCGGGTTGCTTCGCCACGCCGCTGAAAGATTCCCCTCCCGCCGTGCCATCTCCGTTGCCGGAAAATTCGACCTCACCCACTCCCGCCTCCACCAATTGGTCGAATTCGCCGCCGGCCGCTTGGTCTCCGCCGGAATCAAGCCTGGCGATGTTGTTGCCCTCACTTTCCCCAACACCGTCGAGTTTGTTGTAATGTTTTTAGCCGTTATTCGAGCGCGAGCCACGGCAGCGCCGTTAAACCCAGCTTACACATCCGAAGAGTTCGAGTTTTATTTATCTGACTCTGAATCAAAGCTTTTGTTAACGCCGTTAGAAGGTAACGAACCGGCTCAATCCGCTGCCTCGAAGCTCAAAATTCCATTAGGCTCGGCTTTGCTTACTCAAGCCGAAGGAGAACAAGCCGAATTGAACGTTTCACTGAACGAGTCAGAGTCTAAGTCCGACTCGGCTAACTCGCTTGCCGGACTCAGTAACGACCTTTCTGACGTGGCACTATTCCTCCACACCTCCGGCACCACGAGTCGCCCGAAAGGCGTGCCGCTGAGTCAGCACAACTTGGCCTCTTCCGTTAGGAACATCGAGTCGGTATACCGACTCACTGAGTCTGACTCGACGGTGATCGTTCTTCCGTTATTCCACGTTCACGGGTTGATCGCCGGGTTGCTGAGTTCCCTCGGTGCCGGCGCGGCGGTGGCGTTACCGGCGGCGGGGAGGTTCTCGGCTTCGTCGTTTTGGAAGGACATGGTAAAGTACAATGCCACGTGGTACACTGCGGTTCCTACCATACATCAAATTATACTTGATCGCCACTTGAATAACCCGGAACCCGTTTACCCGAGGCTCCGGTTTATTCGGAGCTGTAGTGCATCGCTTGCTCCGGTTATTTTGGGTCGGTTAGAGGAGGCATTTGGAGCCCCGGTTTTGGAGGCTTATGCTATGACTGAGGCCTCTCATCTCATGGCTTCAAACCCGTTGCTGCAAGATGGGCCTCACAAGGCCGGGTCGGTTGGGAAGCCCGTGGGCCAAGAGATGGCTATATTGGATGAAACGGGTCGGATCCTTGAAGCTGAGGCTAGTGGTGAGGTTTGTATTCGGGGACCCAATGTGACAAAAGGATATAAGAACAACTTGGAAGCTAATACGACGGCGTTTCAGTTTGGTTGGTTTCATACCGGTGATCTTGGGTACTTTGATTCGGATGGGTACTTGCATCTCGTGGGTCGGATCAAGGAGCTCATAAACAGAGGAGGAGAGAAAATATCACCAATAGAAGTGGATGCTGTCCTTCTTTCACATCCAGACATTGCTCAGGCAGTTGCTTTCGGAGTGCCAGATGACAAGTATGGGGAAGAGATAAATTGTGCAGTCATCCAAAGAGAAGGATCAAACCTTGATGAGGCAGAAGTACTAAGATATAGCAAGAAGAATCTTGCATCTTTTAAGGTCCCCAAAAGGGTCTTCATTACTGATTCTTTGCCCAAGACTGCCACTGGCAAGATTTTGCGCCGTCTTGTGGCAGAACACTTCACCTCTCAAATTTGA 1563 0.5176 METPLTLTGLLRHAAERFPSRRAISVAGKFDLTHSRLHQLVEFAAGRLVSAGIKPGDVVALTFPNTVEFVVMFLAVIRARATAAPLNPAYTSEEFEFYLSDSESKLLLTPLEGNEPAQSAASKLKIPLGSALLTQAEGEQAELNVSLNESESKSDSANSLAGLSNDLSDVALFLHTSGTTSRPKGVPLSQHNLASSVRNIESVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASSFWKDMVKYNATWYTAVPTIHQIILDRHLNNPEPVYPRLRFIRSCSASLAPVILGRLEEAFGAPVLEAYAMTEASHLMASNPLLQDGPHKAGSVGKPVGQEMAILDETGRILEAEASGEVCIRGPNVTKGYKNNLEANTTAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDDKYGEEINCAVIQREGSNLDEAEVLRYSKKNLASFKVPKRVFITDSLPKTATGKILRRLVAEHFTSQI. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04835 520 Coils Coil 133 153 - -
Seca9g04835 520 ProSitePatterns Putative AMP-binding domain signature. 173 184 IPR020845 -
Seca9g04835 520 Pfam AMP-binding enzyme C-terminal domain 431 506 IPR025110 -
Seca9g04835 520 SUPERFAMILY Acetyl-CoA synthetase-like 4 518 - -
Seca9g04835 520 Gene3D - 416 519 IPR045851 -
Seca9g04835 520 FunFam 4-coumarate--CoA ligase 2 418 519 - -
Seca9g04835 520 PANTHER ACYL-COA SYNTHETASE 6 518 - -
Seca9g04835 520 Gene3D - 5 415 IPR042099 -
Seca9g04835 520 CDD FACL_fum10p_like 19 514 IPR045310 GO:0016874
Seca9g04835 520 Pfam AMP-binding enzyme 12 422 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04835 Seca-Chr9 138368096 138372500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04835 6 520 Monolignol Biosynthesis Gene Families AT4G05160 30.435 1.37e-57 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04835 K22133 - gmx:100779306 849.736