Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04790 ATGGCAAACAACATTTTTAACTTCAGTCGGTTTAATTTTTTCAACTATGTACAACGCCTTCAGCATGACAATCTGGATGAAAATTTTGTATGCAGATTGTGCAACCAACTTTTCACCACCTATCAATCAATCATAACCCATATCGAGACTTGTCATATGCCTCAGGAAAACCTTTCCATAGGAATACTAAACAACCCTCAAAGAGAATTGGTTCCTAGCCCTTTGCAACCTAATTTTTCTAGACCAGCATTGTTGCCGGAAACTAGAAACTTTGCTAATAGCAGGGTTTTCCAGGCACCTCCACGACCACCCGTGGTGATGCCTCAACCTAGAACAAACCCATTTCCTTATGCTAACCTGCAGGTTGTTGTTTCCCGACCACTCTTTCTTCCACCACAGGTCATGCCATCTAGTGGCGGGATTGGGATCGGTGCTACTAATATGGCCCACCAAGGGCGGATGGATGTGTCTCCAATTGATGGAACTAAGCCATATATTGACCTATTGGATAAACCCATTGATAACAATACGGTCGATAATTTGGCTAACATCAATGATGACACATTGAATTTGGATTTAAGGCTCTAG 588 0.4218 MANNIFNFSRFNFFNYVQRLQHDNLDENFVCRLCNQLFTTYQSIITHIETCHMPQENLSIGILNNPQRELVPSPLQPNFSRPALLPETRNFANSRVFQAPPRPPVVMPQPRTNPFPYANLQVVVSRPLFLPPQVMPSSGGIGIGATNMAHQGRMDVSPIDGTKPYIDLLDKPIDNNTVDNLANINDDTLNLDLRL. 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04790 195 ProSitePatterns Zinc finger C2H2 type domain signature. 31 52 IPR013087 -
Seca9g04790 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 29 57 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04790 Seca-Chr9 135544727 135545314 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca9g04790 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04790 - K09228 pvu:PHAVU_007G056300g 129.028