Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g04779 ATGCCCTCCCTTTCCCTTCTTCTCACCTTTTTCGTCCTCTCGGTGCTCGGCACCTCTTTTTCCGAAAGCAGGAAAGAATTGAGGAACAAACATGAAACTGCGTTACGGTTGTTAGGCCACTCGGTTTATTATTCTAACAGAATTGACCCCTCACGTGTTGTCCAAATCTCTTGGCAACCAAGGGTCTTTCTGTACAGAGAGTTTTTGTCGGACAAGGAGTGTGACTACCTTATTTCTCTGGCACATGCTGTGAAAGAAAAATCCTCTGGGAATAATGGACATTCAGAGGAGGATGGAATTTCATTGGATATGGAAGATGATATTGTTGCAAGGATTGAAGAAAGAATGTCTGTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTACAGGTCATGCATTATGGGCTTGAACAGGACGGACAAAACTTAGATTATTTTACAAACAAAACCAAATTGGAATTAAGTGGACCTTTAATGGCAACAGTTGTTTTATATCTCTCAAATGCTACTCAAGGGGGTCAAATCCTCTTTCCTGAATCAGTGCCCAAGAGTAGCAGCTGGTCAGATTGTAGAAATAGTAGTAAGATTCTCCAACCAGAAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCCAAGTGCATCTCCTGACAAGAGTAGCCTCCATGCTAGATGCCCTTTCCTTAAGGGGGATATGTGGTCTGCAATTAAATTCTTCTATGCAAGATCAATTAGTGGAGGGAAGGTCTCAACCATATCTGATGGTGGTGAATGTACTGATGAGGATGACAATTGTCCTGCTTGGGCAGCCATGGGAGAATGTCAACGAAACCCTGTTTACATGATTGGGTCTCCTGATTATTATGGTACATGTAGGAAAAGCTCTGAAGCCTCCGCTTCGATGGCTTCGAGCCAATTTGATCGTGCAGGCCCCAATCCGGGTCGGAAGGTTCGGGTCGTGGCCAAAATCCGGGGCTTTCCGGGTCCAGACTCCAATTCCGCAACCAGTTATTCGAGAACGGTGGAGTGGGTTTCGGTGAATCGGGAAAATTCGGAGGATGTCACCATCTCCTTCGGGGAACAGTCTTCGAGTCGGTATTTGGTGGACTATTGCTATAAGGAATATGAAGATAATGAGATGATATATTCAAGGGAGGTGAAGCCTCTTGTTTCTGCAGCCTTTGAAGGTCACAACAGCACTGTTATTGCTCATGGAGCTAGAGGCAGTGGAAAGACCCACGTAATTCAGGGCTCTACTGAGATACCAGGGTTAGCAGTGCTTGCTACTGCTGAGTTTCTTTCAATGGCCGAGAAAAATGGGAAATCTATAGCTGTTTCTTTCTATGAGGTTGATCATCAGGAGCATGCTGTTGATTTGTTAAATCCAGAACAACCACCAATTTTGGTATTTGAAGATCGTGGAAGAATTCAGTTTAAAGGACTTACTCAGATTCCTGTGAAATCCGTTGCTGAGTTTCAGAATTTGTACCTCACTGCATGTTCTGCACAAAAGCCAGCTCCTAAAAAAGGCTATGAGCGTCCACGTAGAAGCCACAGGGGATTAATTGTGCATGTCTTTTCCCAGAATGAAAGTGTAGGCCTTGTGAGCAAAATGAATTTTGTTGACTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGCAGTGATGGCACTTGCCTTGCTGAGACCAACAAAATTAACAAGTCAATTTATGCCTTACTGAATGTTTGTCATGCTTTGAGCACAAATGAAAGTCGTGTTCCCTACCGGGAAAGCAAACTTACACGCATGTTGCAGGATTCCTTGAGGGGAACTAGCAAAATTTTGTTGGTTTCTTGCTTGAATCCATCGTTTTGCCAAGACACTATTTACATGGTAAGCTTAGCATCAAGGTGTTGTCAATGGATTCATCGAACACCCTTGGATTCCACAAAGAGAAATGGAAGTTCAGCAAGACAGATTGTGACTTCTCAAAAGAACCAGATACCCAAAAGTGTTTCTGGAACCGAAAAGAAATTAATGGGTTCCAGATCTCGTATATATGAAAAGAAAGGTGCTGTTGCTGCAAAGTCTGCAATGAAAGGAAGGAAATTGTTTGATGAAGCCAGCCATTCTGCTGCTAAAGCTGAGAAGGAAATTTCCATTGCCCGTGTTACCAAAGCATCAGAGCCTTTATTGGACAATTCTTCAGCAGTAGCTGGAAATCATGAACTCAGCTCTAGAGTAGGAACGAATGCCTCATTTTTTAATGCTAGCAGGGAAGTGGAAATTGATCTCCTAGTGGAAAAGGATAATTCATTTCCAGATGCTAGTAATAATGTGAAACTCAATCTGTTGGTGGAAAATGTTGACTCATCTTTGAATGCTAGCAGTGAACTGGAACTTGATCCCCTAGTGGAAAAGGGTATTTCTGTGGATAGGGAGGATCATCAAGAGAAACATACCCCTTATGATAGTGATTACTCCAAAGCACTGTCAACAATAATTCAAGAAGGCCATAACATGAACAAAGAGAACAACAGCTTAGTGGCAAATGAAGATGGTTCACCACCCATTAGTTCTCAACTGCGTGATCTTTCTGAAAGTCTTAAAATGCTCTACTCGTCAGCTCCATTATGCGTGCGGATACCGGAGAAGGAATGCATTTCACTTGATGATAAGATGTCTGCAGATGTTGTGGAACCAAAAACTCCTGTAATTGAACAAAACATGTGCTTTAATGAAAGATGGGATCTAATGAATGTCAAAAGTCCTTGGGAAACATTCAGCTTGCGTGGTTCTGGAATGAAGAATTCTCTTGTTCAAGAATACCTGAGGTTTTTGAACAATACTGACAGGGAAGAATTGAAAAAGTTAAAGGGAATTGGAGAGAAGAGAGCAACCTACATACTTGAGCTTCGTGAAGAATCTCCAGAACCTTTCAAGAGTCTTGATGATTTAAAAGACATTGGACTTTCGGCTAAGCAGATTAAGGGAATCGTGAAGAAGGAAGTTGGAGAGCTATTCAATTAG 3012 0.4213 MPSLSLLLTFFVLSVLGTSFSESRKELRNKHETALRLLGHSVYYSNRIDPSRVVQISWQPRVFLYREFLSDKECDYLISLAHAVKEKSSGNNGHSEEDGISLDMEDDIVARIEERMSVWTFLPKENSKPLQVMHYGLEQDGQNLDYFTNKTKLELSGPLMATVVLYLSNATQGGQILFPESVPKSSSWSDCRNSSKILQPEKGNAILFFSLHPSASPDKSSLHARCPFLKGDMWSAIKFFYARSISGGKVSTISDGGECTDEDDNCPAWAAMGECQRNPVYMIGSPDYYGTCRKSSEASASMASSQFDRAGPNPGRKVRVVAKIRGFPGPDSNSATSYSRTVEWVSVNRENSEDVTISFGEQSSSRYLVDYCYKEYEDNEMIYSREVKPLVSAAFEGHNSTVIAHGARGSGKTHVIQGSTEIPGLAVLATAEFLSMAEKNGKSIAVSFYEVDHQEHAVDLLNPEQPPILVFEDRGRIQFKGLTQIPVKSVAEFQNLYLTACSAQKPAPKKGYERPRRSHRGLIVHVFSQNESVGLVSKMNFVDLAGYEDARKKSSDGTCLAETNKINKSIYALLNVCHALSTNESRVPYRESKLTRMLQDSLRGTSKILLVSCLNPSFCQDTIYMVSLASRCCQWIHRTPLDSTKRNGSSARQIVTSQKNQIPKSVSGTEKKLMGSRSRIYEKKGAVAAKSAMKGRKLFDEASHSAAKAEKEISIARVTKASEPLLDNSSAVAGNHELSSRVGTNASFFNASREVEIDLLVEKDNSFPDASNNVKLNLLVENVDSSLNASSELELDPLVEKGISVDREDHQEKHTPYDSDYSKALSTIIQEGHNMNKENNSLVANEDGSPPISSQLRDLSESLKMLYSSAPLCVRIPEKECISLDDKMSADVVEPKTPVIEQNMCFNERWDLMNVKSPWETFSLRGSGMKNSLVQEYLRFLNNTDREELKKLKGIGEKRATYILELREESPEPFKSLDDLKDIGLSAKQIKGIVKKEVGELFN. 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g04779 1003 Gene3D - 929 1001 - -
Seca9g04779 1003 SMART kinesin_4 315 643 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g04779 1003 Pfam Kinesin motor domain 339 632 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g04779 1003 PANTHER KINESIN-RELATED 352 792 IPR027640 GO:0003777|GO:0007018
Seca9g04779 1003 SUPERFAMILY RuvA domain 2-like 933 995 IPR010994 -
Seca9g04779 1003 Pfam ShK domain-like 258 282 IPR003582 -
Seca9g04779 1003 FunFam Kinesin-like protein KIN-10C 307 636 - -
Seca9g04779 1003 ProSiteProfiles Kinesin motor domain profile. 317 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g04779 1003 Gene3D Kinesin motor domain 302 634 IPR036961 -
Seca9g04779 1003 Gene3D q2cbj1_9rhob like domain 52 241 - -
Seca9g04779 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 314 633 IPR027417 -
Seca9g04779 1003 SMART p4hc 60 241 IPR006620 GO:0005506|GO:0016705|GO:0031418
Seca9g04779 1003 FunFam Kinesin-like protein KIN-10C 927 1001 - -
Seca9g04779 1003 PRINTS Kinesin heavy chain signature 538 556 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g04779 1003 PRINTS Kinesin heavy chain signature 397 418 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g04779 1003 PRINTS Kinesin heavy chain signature 587 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca9g04779 1003 FunFam Probable prolyl 4-hydroxylase 12 52 241 - -
Seca9g04779 1003 Pfam 2OG-Fe(II) oxygenase superfamily 131 241 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g04779 Seca-Chr9 134844852 134864177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g04779 367 617 Calmodulin-binding Proteins AT5G65930 31.769 4.81e-28 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g04779 K10403 - gmx:100809612 955.281